RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 KRT9P35527 623 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 SOX5P35711 763 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 BMPR1AP36894 532 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 ZBED6P86452 979 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 TAP1Q03518 808 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 FAM171A1Q5VUB5 890 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 TC2NQ8N9U0 490 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 KLHL23Q8NBE8 558 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 JAKMIP2Q96AA8 810 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 TMEM169Q96HH4 297 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 NKX2-4Q9H2Z4 354 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 IMPACTQ9P2X3 320 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 CNTN6Q9UQ52 1028 aa15.16■□□□□ 0.02
RNF4-208ENST00000507247 CARNS1A5YM72 827 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 AKR1B15C9JRZ8 316 aaPredicted RBP15.15■□□□□ 0.02
RNF4-208ENST00000507247 SYN3O14994 580 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 TRAPPC3O43617 180 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 FGF18O76093 207 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 GFPT2O94808 682 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 CALCAP01258 141 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 FGFR3P22607 806 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 LMO2P25791 158 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 PPM1AP35813 382 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 USP8P40818 1118 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 STAT1P42224 750 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 ZNF132P52740 706 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 NDST1P52848 882 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 YWHAEP62258 255 aaKnown RBP15.15■□□□□ 0.02
RNF4-208ENST00000507247 ELAVL2Q12926 359 aaKnown RBP15.15■□□□□ 0.02
RNF4-208ENST00000507247 ORC1Q13415 861 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 ARID5BQ14865 1188 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 RAB30Q15771 203 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 ZNF394Q53GI3 561 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 TMEM270Q6UE05 265 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.15■□□□□ 0.02
RNF4-208ENST00000507247 FAM71AQ8IYT1 594 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 TMEM86AQ8N2M4 240 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 RBBP8NLQ8NC74 664 aaPredicted RBP15.15■□□□□ 0.02
RNF4-208ENST00000507247 OR6B3Q8NGW1 331 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 RTP3Q9BQQ7 232 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 HERC2P3Q9BVR0 1158 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 ELOVL4Q9GZR5 314 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 ACP6Q9NPH0 428 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 DSEQ9UL01 958 aa15.15■□□□□ 0.02
RNF4-208ENST00000507247 BARX2Q9UMQ3 279 aaPredicted RBP15.15■□□□□ 0.02
RNF4-208ENST00000507247 COL4A4P53420 1690 aaPredicted RBP15.14■□□□□ 0.01
RNF4-208ENST00000507247 C5orf67F2Z3F1 127 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 CYP26A1O43174 497 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 SOD2P04179 222 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 TPM1P09493 284 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 FAM163BP0C2L3 166 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 KRT5P13647 590 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 CLCN1P35523 988 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 GNL1P36915 607 aaPredicted RBP15.14■□□□□ 0.01
RNF4-208ENST00000507247 RAD23BP54727 409 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 PLCB3Q01970 1234 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 RTP2Q5QGT7 225 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 SFMBT2Q5VUG0 894 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 OVOS1Q6IE37 1185 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 DDX53Q86TM3 631 aaKnown RBP15.14■□□□□ 0.01
RNF4-208ENST00000507247 CEP57Q86XR8 500 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 CNGA4Q8IV77 575 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 ZNF397Q8NF99 534 aaPredicted RBP15.14■□□□□ 0.01
RNF4-208ENST00000507247 SPATA18Q8TC71 538 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 TGS1Q96RS0 853 aaKnown RBP15.14■□□□□ 0.01
RNF4-208ENST00000507247 DNAJC7Q99615 494 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 SNX25Q9H3E2 840 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 DPEP3Q9H4B8 488 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 FAM124BQ9H5Z6 455 aaPredicted RBP15.14■□□□□ 0.01
RNF4-208ENST00000507247 ABHD10Q9NUJ1 306 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 DDX43Q9NXZ2 648 aaKnown RBP15.14■□□□□ 0.01
RNF4-208ENST00000507247 MSRAQ9UJ68 235 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 MTUS1Q9ULD2 1270 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 RWDD3Q9Y3V2 267 aa15.14■□□□□ 0.01
RNF4-208ENST00000507247 ARHGEF37A1IGU5 675 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 A8MXQ7 604 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 PDGFRBP09619 1106 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 ACAT1P24752 427 aaKnown RBP15.13■□□□□ 0.01
RNF4-208ENST00000507247 LHX1P48742 406 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 ERVK-21P61565 698 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 ARID5AQ03989 594 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 YWHAHQ04917 246 aaPredicted RBP15.13■□□□□ 0.01
RNF4-208ENST00000507247 CCDC173Q0VFZ6 552 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 MRPL58Q14197 206 aaKnown RBP15.13■□□□□ 0.01
RNF4-208ENST00000507247 CCDC142Q17RM4 750 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 USP41Q3LFD5 358 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 VARS2Q5ST30 1063 aaKnown RBP15.13■□□□□ 0.01
RNF4-208ENST00000507247 KIAA0319Q5VV43 1072 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 WDR59Q6PJI9 974 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 PRSS55Q6UWB4 352 aaPredicted RBP15.13■□□□□ 0.01
RNF4-208ENST00000507247 CCDC186Q7Z3E2 898 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 UNC93AQ86WB7 457 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 METTL23Q86XA0 190 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 SLC4A11Q8NBS3 891 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 OR8K1Q8NGG5 319 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 OR10T2Q8NGX3 314 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 PPP1R9BQ96SB3 815 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 TMEM209Q96SK2 561 aa15.13■□□□□ 0.01
RNF4-208ENST00000507247 LPIN3Q9BQK8 851 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms