RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 CORO1BQ9BR76 489 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 REEP2Q9BRK0 252 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 AP1M1Q9BXS5 423 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 DDX47Q9H0S4 455 aaKnown RBP6.26□□□□□ -1.41
CLDND1-213ENST00000506927 ZFYVE1Q9HBF4 777 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 CYP4F12Q9HCS2 524 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 MAP3K20Q9NYL2 800 aaKnown RBP6.26□□□□□ -1.41
CLDND1-213ENST00000506927 EHD2Q9NZN4 543 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 CTTNBP2NLQ9P2B4 639 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 KLHL14Q9P2G3 628 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 CTNNAL1Q9UBT7 734 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 DNAJC12Q9UKB3 198 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 NENFQ9UMX5 172 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 RAXQ9Y2V3 346 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 ARL2BPQ9Y2Y0 163 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 MRPL11Q9Y3B7 192 aaKnown RBP6.26□□□□□ -1.41
CLDND1-213ENST00000506927 USP15Q9Y4E8 981 aaPredicted RBP6.26□□□□□ -1.41
CLDND1-213ENST00000506927 MYH7BA7E2Y1 1941 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 MYH4Q9Y623 1939 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 NHSQ6T4R5 1651 aa6.26□□□□□ -1.41
CLDND1-213ENST00000506927 FRMPD2Q68DX3 1309 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 SNED1Q8TER0 1413 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 FOCADQ5VW36 1801 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 ARHGEF35A5YM69 484 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 DDX3XO00571 662 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 ABLIM1O14639 778 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 KIAA0391O15091 583 aaKnown RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 PPIP5K2O43314 1243 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 SPOPO43791 374 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 EXOC3O60645 756 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 ZC3H11AO75152 810 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 DCTN3O75935 186 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 TIAF1O95411 115 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 BMP3P12645 472 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 SLC9A1P19634 815 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 DRD4P21917 467 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 TM4SF1P30408 202 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 HOXA10P31260 410 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 PRELPP51888 382 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 SEC24CP53992 1094 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 PLTPP55058 493 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 RHBDL3P58872 404 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 RNASE9P60153 205 aaKnown RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 PPATQ06203 517 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 IKQ13123 557 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 PABPC4Q13310 644 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 PPP2R5CQ13362 524 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 CERKLQ49MI3 558 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 PRR16Q569H4 304 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 WDR78Q5VTH9 848 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 CCDC174Q6PII3 467 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 CCDC137Q6PK04 289 aaKnown RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 TRIM72Q6ZMU5 477 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 PCGF5Q86SE9 256 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 SFR1Q86XK3 245 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 JAMLQ86YT9 394 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 FAM20CQ8IXL6 584 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 LINC00116Q8NCU8 138 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 ETNPPLQ8TBG4 499 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 TCP11Q8WWU5 503 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 ZKSCAN4Q969J2 545 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 CFAP57Q96MR6 1250 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 SCLT1Q96NL6 688 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 RIT2Q99578 217 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 ZSWIM1Q9BR11 485 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 FRMD8P1Q9BZ68 369 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 TXLNGYQ9BZA5 131 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 INTS2Q9H0H0 1204 aaKnown RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 LRRC19Q9H756 370 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 KIAA1586Q9HCI6 787 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 MRPL47Q9HD33 250 aaKnown RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 KCNQ5Q9NR82 932 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 SEPT11Q9NVA2 429 aaKnown RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 STOML1Q9UBI4 398 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 GPN3Q9UHW5 284 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-213ENST00000506927 MCM8Q9UJA3 840 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 ALG6Q9Y672 507 aa6.25□□□□□ -1.41
CLDND1-213ENST00000506927 GIPC1O14908 333 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 GAS2O43903 313 aaKnown RBP6.24□□□□□ -1.41
CLDND1-213ENST00000506927 PLA2G6O60733 806 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 GAS7O60861 476 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 HIP1RO75146 1068 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 CDH16O75309 829 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 MED24O75448 989 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 AKAP3O75969 853 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 ATP6V1G2O95670 118 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 FTLP02792 175 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-213ENST00000506927 POLR2MP0CAP2 368 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 AKR1B1P15121 316 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 CHN1P15882 459 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 ECHS1P30084 290 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 GSTT1P30711 240 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 COILP38432 576 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-213ENST00000506927 CLNS1AP54105 237 aaKnown RBP6.24□□□□□ -1.41
CLDND1-213ENST00000506927 IRX1P78414 480 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-213ENST00000506927 POU5F1Q01860 360 aaKnown RBP6.24□□□□□ -1.41
CLDND1-213ENST00000506927 SOX4Q06945 474 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-213ENST00000506927 BFSP1Q12934 665 aa6.24□□□□□ -1.41
CLDND1-213ENST00000506927 ACVR2BQ13705 512 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms