RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 LY6G5CQ5SRR4 150 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 SP5Q6BEB4 398 aaPredicted RBP3.66□□□□□ -1.82
GYPB-207ENST00000506679 FOXR2Q6PJQ5 311 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 GPR149Q86SP6 731 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 ULK2Q8IYT8 1036 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 ASB10Q8WXI3 467 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 LARP4BQ92615 738 aaKnown RBP3.66□□□□□ -1.82
GYPB-207ENST00000506679 TRIB1Q96RU8 372 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 P2RX7Q99572 595 aaKnown RBP3.66□□□□□ -1.82
GYPB-207ENST00000506679 SMOQ99835 787 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 BHMT2Q9H2M3 363 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 SERHL2Q9H4I8 314 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 SYBUQ9NX95 663 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 REXO2Q9Y3B8 237 aaKnown RBP3.66□□□□□ -1.82
GYPB-207ENST00000506679 NOX1Q9Y5S8 564 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 COL4A3Q01955 1670 aa3.65□□□□□ -1.82
GYPB-207ENST00000506679 PIPSLA2A3N6 862 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 GRID2IPA4D2P6 1211 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 UNC119BA6NIH7 251 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 GOLIM4O00461 696 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 TBX3O15119 743 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 KIF20AO95235 890 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 FOSP01100 380 aaPredicted RBP3.65□□□□□ -1.83
GYPB-207ENST00000506679 TGM1P22735 817 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 ZEB1P37275 1124 aaPredicted RBP3.65□□□□□ -1.83
GYPB-207ENST00000506679 MXRA7P84157 204 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 ABHD18Q0P651 414 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 DYRK1AQ13627 763 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 BOP1Q14137 746 aaKnown RBP3.65□□□□□ -1.83
GYPB-207ENST00000506679 HLXQ14774 488 aaPredicted RBP3.65□□□□□ -1.83
GYPB-207ENST00000506679 POLD3Q15054 466 aaPredicted RBP3.65□□□□□ -1.83
GYPB-207ENST00000506679 GEN1Q17RS7 908 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 SPDYE7PQ495Y7 208 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 HSP90AB2PQ58FF8 381 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 ABHD17BQ5VST6 288 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 RNF220Q5VTB9 566 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 FAM160B1Q5W0V3 765 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 KCNV1Q6PIU1 500 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.65□□□□□ -1.83
GYPB-207ENST00000506679 ZNF627Q7L945 461 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 CLNKQ7Z7G1 428 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 LNX2Q8N448 690 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 FAM109AQ8N4B1 249 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 NSUN7Q8NE18 718 aaKnown RBP3.65□□□□□ -1.83
GYPB-207ENST00000506679 LRTOMTQ8WZ04 291 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 MAML1Q92585 1016 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 RNF31Q96EP0 1072 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 SPATA5L1Q9BVQ7 753 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 SMURF2Q9HAU4 748 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 CNNM1Q9NRU3 951 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.65□□□□□ -1.83
GYPB-207ENST00000506679 ANKFY1Q9P2R3 1169 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 HESX1Q9UBX0 185 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 RGS17Q9UGC6 210 aaPredicted RBP3.65□□□□□ -1.83
GYPB-207ENST00000506679 CPA4Q9UI42 421 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 MTO1Q9Y2Z2 717 aaKnown RBP3.65□□□□□ -1.83
GYPB-207ENST00000506679 PLEKHM1Q9Y4G2 1056 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 SPATA31A3Q5VYP0 1347 aa3.65□□□□□ -1.83
GYPB-207ENST00000506679 A0A087WWL8 130 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 ISM1B1AKI9 464 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 M0QYG6 137 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 POLRMTO00411 1230 aaKnown RBP3.64□□□□□ -1.83
GYPB-207ENST00000506679 DCLK1O15075 740 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 SOAT2O75908 522 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 UNC5CO95185 931 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 THP07101 528 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 ADH4P08319 380 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 KITP10721 976 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 MYF5P13349 255 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 VIPR2P41587 438 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 TBX4P57082 545 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 RPS7P62081 194 aaKnown RBP3.64□□□□□ -1.83
GYPB-207ENST00000506679 BLOC1S1P78537 153 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 CCDC181Q5TID7 509 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 TAF2Q6P1X5 1199 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 DARS2Q6PI48 645 aaKnown RBP3.64□□□□□ -1.83
GYPB-207ENST00000506679 PCSK4Q6UW60 755 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 Q6YL49 198 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 CCDC149Q6ZUS6 474 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 COLGALT2Q8IYK4 626 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 ADGRG5Q8IZF4 528 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 KRT78Q8N1N4 520 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 PSD4Q8NDX1 1056 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 LINC00476Q8WZB0 136 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 TTC17Q96AE7 1141 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 APIPQ96GX9 242 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 COQ10AQ96MF6 247 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 PRRX2Q99811 253 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 SARGQ9BW04 601 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 WDR11Q9BZH6 1224 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 SCAND2PQ9GZW5 306 aaPredicted RBP3.64□□□□□ -1.83
GYPB-207ENST00000506679 STK32BQ9NY57 414 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.64□□□□□ -1.83
GYPB-207ENST00000506679 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.64□□□□□ -1.836e-10■■■■■ 33.8
GYPB-207ENST00000506679 USP19O94966 1318 aa3.64□□□□□ -1.83
GYPB-207ENST00000506679 CFAP69A5D8W1 941 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 CYR61O00622 381 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 PROM1O43490 865 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 GRPP07492 148 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 SRGNP10124 158 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms