RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ENPEPQ07075 957 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 PPP3CAQ08209 521 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 BIRC3Q13489 604 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 SOWAHAQ2M3V2 549 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 TPGS2Q68CL5 300 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 SV2AQ7L0J3 742 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 ELMO3Q96BJ8 720 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 RIPOR3Q96MK2 946 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 PHF7Q9BWX1 381 aaPredicted RBP19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 RHOBTB2Q9BYZ6 727 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 PRKD2Q9BZL6 878 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 AFF4Q9UHB7 1163 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 C19orf67A6NJJ6 358 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 GOLGA6L22H0YM25 854 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 IKBKBO14920 756 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 HCRTO43612 131 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 HUS1O60921 280 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 STAU1O95793 577 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 EPB41P11171 864 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 KRT13P13646 458 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 HOXA9P31269 272 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 STX17P56962 302 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 ADCY1Q08828 1119 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 GPR17Q13304 367 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 TRPC3Q13507 836 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 NCOA4Q13772 614 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 PPM1LQ5SGD2 360 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 ATAT1Q5SQI0 421 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 METTL23Q86XA0 190 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 ADGRF2Q8IZF7 708 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 TOP6BLQ8N6T0 577 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 KBTBD7Q8WVZ9 684 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 SMG7Q92540 1137 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 NECTIN4Q96NY8 510 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 PGLYRP2Q96PD5 576 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 ZCWPW1Q9H0M4 648 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 CRISPLD1Q9H336 500 aa19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 R3HCC1Q9Y3T6 440 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-216ENST00000506537 MTMR11A4FU01 709 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 CCL16O15467 120 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 PHACTR2O75167 634 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 HNRNPA1P09651 372 aaKnown RBP eCLIP19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 GCLMP48507 274 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 PAK1Q13153 545 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 UVSSAQ2YD98 709 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 FOXR2Q6PJQ5 311 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 LRRTM3Q86VH5 581 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 TCEAL8Q8IYN2 117 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 TMEM86AQ8N2M4 240 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 VRTNQ9H8Y1 702 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 CYP4F11Q9HBI6 524 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 POLIQ9UNA4 740 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 DOCK6Q96HP0 2047 aa19.58■□□□□ 0.72
PDLIM7-216ENST00000506537 LOC730098B7Z3J9 87 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 GABRDO14764 452 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 SP100P23497 879 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 ATICP31939 592 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 CDR1P51861 262 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 CCDC142Q17RM4 750 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 WDR72Q3MJ13 1102 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 CYP26C1Q6V0L0 522 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 CCDC149Q6ZUS6 474 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 THEM5Q8N1Q8 247 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 TTC9BQ8N6N2 239 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 SPATA18Q8TC71 538 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 SYAP1Q96A49 352 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 MED15Q96RN5 788 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 DDX43Q9NXZ2 648 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 NME7Q9Y5B8 376 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 INSL5Q9Y5Q6 135 aa19.57■□□□□ 0.72
PDLIM7-216ENST00000506537 CLUHO75153 1309 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 BICDL2A1A5D9 508 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 PRRG1O14668 218 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 HLA-DRAP01903 254 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 POU2F2P09086 479 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 ACAT1P24752 427 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 ELF1P32519 619 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 ZNF699Q32M78 642 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 SLC39A12Q504Y0 691 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 RTL10Q7L3V2 364 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 DPH6Q7L8W6 267 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 GJD3Q8N144 294 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 ATAD1Q8NBU5 361 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 TAS1R2Q8TE23 839 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 RPGRIP1Q96KN7 1286 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 CEP63Q96MT8 703 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 MMS19Q96T76 1030 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 PKMYT1Q99640 499 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 MRPL45Q9BRJ2 306 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 SMYD3Q9H7B4 428 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 MMRN2Q9H8L6 949 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 TMEM8AQ9HCN3 771 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 WDR6Q9NNW5 1121 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 TMLHEQ9NVH6 421 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 MAFFQ9ULX9 164 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 NOTCH4Q99466 2003 aa19.56■□□□□ 0.72
PDLIM7-216ENST00000506537 TNFRSF10AO00220 468 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 LRRN2O75325 713 aa19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 ASS1P00966 412 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-216ENST00000506537 WARSP23381 471 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms