RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 SNW1Q13573 536 aaKnown RBP11.24□□□□□ -0.61
NR1I3-222ENST00000506018 ANGPT1Q15389 498 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 SLC44A4Q53GD3 710 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 ARHGAP15Q53QZ3 475 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 FOXD4L5Q5VV16 416 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-222ENST00000506018 CENPPQ6IPU0 288 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 DCP1BQ8IZD4 617 aaKnown RBP11.24□□□□□ -0.61
NR1I3-222ENST00000506018 ST13P5Q8NFI4 369 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-222ENST00000506018 PJA1Q8NG27 643 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 FAM200AQ8TCP9 573 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 FOXD4L4Q8WXT5 416 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-222ENST00000506018 DNASE1L2Q92874 299 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 IRF7Q92985 503 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 SAAL1Q96ER3 474 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 ANKRD36BP1Q96IX9 119 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 GCNAQ96QF7 691 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 NELL2Q99435 816 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 RPP25Q9BUL9 199 aaKnown RBP11.24□□□□□ -0.61
NR1I3-222ENST00000506018 BCO2Q9BYV7 579 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 BRD9Q9H8M2 597 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 KIAA1586Q9HCI6 787 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 KBTBD4Q9NVX7 518 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 CEP72Q9P209 647 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 ITGA11Q9UKX5 1188 aa11.24□□□□□ -0.61
NR1I3-222ENST00000506018 NUP210Q8TEM1 1887 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-222ENST00000506018 UBE4BO95155 1302 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 A0A087X0B3 334 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 ZNF233A6NK53 670 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 EIF3DO15371 548 aaKnown RBP eCLIP11.23□□□□□ -0.61
NR1I3-222ENST00000506018 GFRA3O60609 400 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 HUS1O60921 280 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 PRPF6O94906 941 aaKnown RBP11.23□□□□□ -0.61
NR1I3-222ENST00000506018 PSMC3P17980 439 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 NBL1P41271 181 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 CASP5P51878 434 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 KCNA1Q09470 495 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 MYO1EQ12965 1108 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 MGAT5BQ3V5L5 792 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 SLC39A12Q504Y0 691 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 ZC3H14Q6PJT7 736 aaKnown RBP11.23□□□□□ -0.61
NR1I3-222ENST00000506018 CRELD2Q6UXH1 353 aaPredicted RBP11.23□□□□□ -0.61
NR1I3-222ENST00000506018 YAF2Q8IY57 180 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 EFCAB13Q8IY85 973 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 SPPL2BQ8TCT7 592 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 DEPDC1BQ8WUY9 529 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 SMARCD2Q92925 531 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 TCEAL4Q96EI5 215 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 ASB16Q96NS5 453 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 SEPT5Q99719 369 aaPredicted RBP11.23□□□□□ -0.61
NR1I3-222ENST00000506018 TRMT61BQ9BVS5 477 aaKnown RBP11.23□□□□□ -0.61
NR1I3-222ENST00000506018 OSBPL6Q9BZF3 934 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 TRIM9Q9C026 710 aa11.23□□□□□ -0.61
NR1I3-222ENST00000506018 DENND4CQ5VZ89 1909 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 TICRRQ7Z2Z1 1910 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 PROB1E7EW31 1015 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 MAN2B1O00754 1011 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 DPYSL4O14531 572 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 SPTLC1O15269 473 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 POLR2DO15514 142 aaKnown RBP11.22□□□□□ -0.61
NR1I3-222ENST00000506018 TNNC2P02585 160 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 ITGB3P05106 788 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 KRT19P08727 400 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 POLR2BP30876 1174 aaKnown RBP11.22□□□□□ -0.61
NR1I3-222ENST00000506018 SNRPFP62306 86 aaKnown RBP11.22□□□□□ -0.61
NR1I3-222ENST00000506018 RBP5P82980 135 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 MYL7Q01449 175 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 UBXN2BQ14CS0 331 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 E2F4Q16254 413 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 NFE2Q16621 373 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-222ENST00000506018 FOXD4L6Q3SYB3 417 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-222ENST00000506018 FAM78AQ5JUQ0 283 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 FAM26FQ5R3K3 315 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 TANGO2Q6ICL3 276 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 CNNM4Q6P4Q7 775 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 FOXD4L3Q6VB84 417 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-222ENST00000506018 ZNF852Q6ZMS4 543 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 HS2ST1Q7LGA3 356 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 CEP57L1Q8IYX8 460 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 TMEM86AQ8N2M4 240 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 TMEM130Q8N3G9 435 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 CSGALNACT2Q8N6G5 542 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 LRRC52Q8N7C0 313 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 ATAD1Q8NBU5 361 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 ZSCAN18Q8TBC5 510 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-222ENST00000506018 SPATA18Q8TC71 538 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 NKD2Q969F2 451 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-222ENST00000506018 PSMG2Q969U7 264 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 GBP4Q96PP9 640 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 PHOX2BQ99453 314 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 CBWD1Q9BRT8 395 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 ZCWPW1Q9H0M4 648 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 ATXN3LQ9H3M9 355 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 PCIF1Q9H4Z3 704 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 ZMYM5Q9UJ78 669 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 AGAP1Q9UPQ3 857 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 SLC27A5Q9Y2P5 690 aa11.22□□□□□ -0.61
NR1I3-222ENST00000506018 A0A1W2PRU2 124 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 GOLGA8IPA6NC78 632 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms