RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 CHMP4BQ9H444 224 aaKnown RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 EBF3Q9H4W6 596 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 RTN4Q9NQC3 1192 aaKnown RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 CEP72Q9P209 647 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 FTSJ1Q9UET6 329 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 RABGEF1Q9UJ41 708 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 MAFFQ9ULX9 164 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 IPPQ9Y573 584 aa4.7□□□□□ -1.66
CPNE4-204ENST00000505331 USP9YO00507 2555 aaPredicted RBP4.7□□□□□ -1.66
CPNE4-204ENST00000505331 PCDH15Q96QU1 1955 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 FLNCQ14315 2725 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 LRBAP50851 2863 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 PNMA6FA0A0J9YX94 578 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 WIPF3A6NGB9 483 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 PPP1R3GB7ZBB8 358 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 MEIS2O14770 477 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 IPO8O15397 1037 aaKnown RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 PCDHGA12O60330 932 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 ZNF217O75362 1048 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 FGF19O95750 216 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 HSP90AA1P07900 732 aaKnown RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 FAM87AP0C7U9 286 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 HNRNPLP14866 589 aaKnown RBP eCLIP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 GLDCP23378 1020 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 MCM4P33991 863 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 NT5C2P49902 561 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 DNM2P50570 870 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 USP11P51784 963 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 SEC13P55735 322 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 ROR1Q01973 937 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 CYP4A11Q02928 519 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 TWF1Q12792 350 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 ITGB3BPQ13352 177 aaPredicted RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 TUSC3Q13454 348 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 SART3Q15020 963 aaKnown RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 PDGFRLQ15198 375 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 HS1BP3Q53T59 392 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 SGO2Q562F6 1265 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 EOGTQ5NDL2 527 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 STXBP5Q5T5C0 1151 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 FHL5Q5TD97 284 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 C1QL3Q5VWW1 255 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 TPGS2Q68CL5 300 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 NAIF1Q69YI7 327 aaPredicted RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 TRIM68Q6AZZ1 485 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 TRMT1LQ7Z2T5 733 aaKnown RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 MTERF4Q7Z6M4 381 aaKnown RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 ATCAYQ86WG3 371 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 IQCA1Q86XH1 822 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 HACE1Q8IYU2 909 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 MMP21Q8N119 569 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 STAG2Q8N3U4 1231 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 CPA6Q8N4T0 437 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 CCDC33Q8N5R6 958 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 DCBLD1Q8N8Z6 715 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 GSTCDQ8NEC7 633 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 ZNF564Q8TBZ8 553 aaPredicted RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 HMGB4Q8WW32 186 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 ESR2Q92731 530 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 DDX27Q96GQ7 796 aaKnown RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 GBP4Q96PP9 640 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 PIGSQ96S52 555 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 MXRA8Q9BRK3 442 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 PAAF1Q9BRP4 392 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 LARP6Q9BRS8 491 aaKnown RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 POLR3CQ9BUI4 534 aaPredicted RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 C1orf115Q9H7X2 142 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 AGO4Q9HCK5 861 aaKnown RBP4.69□□□□□ -1.66
CPNE4-204ENST00000505331 THSD1Q9NS62 852 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 NRBP2Q9NSY0 501 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 CLCA2Q9UQC9 943 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 NFE2L3Q9Y4A8 694 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 PCDHGA10Q9Y5H3 936 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 LRRK2Q5S007 2527 aa4.69□□□□□ -1.66
CPNE4-204ENST00000505331 ABCA2Q9BZC7 2435 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 ATG2BQ96BY7 2078 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 A0A087X0B3 334 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 IGHV1OR15-9A0A0B4J2B8 117 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 TCRBV21S2A2A0A5A6 115 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 A1L4Q6 167 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 K7EQS6 105 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 ENC1O14682 589 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 FOXP2O15409 715 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 NDUFS2O75306 463 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 SEC24AO95486 1093 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 PRAMEF12O95522 483 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 C8BP07358 591 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 TRIM27P14373 513 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 ARSAP15289 507 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 HOXB4P17483 251 aaPredicted RBP4.68□□□□□ -1.66
CPNE4-204ENST00000505331 HOXA11P31270 313 aaPredicted RBP4.68□□□□□ -1.66
CPNE4-204ENST00000505331 ASIC1P78348 528 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 ILKQ13418 452 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 DRP2Q13474 957 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 SKIDA1Q1XH10 827 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 PROX2Q3B8N5 592 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 ARHGAP15Q53QZ3 475 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 GPR158Q5T848 1215 aa4.68□□□□□ -1.66
CPNE4-204ENST00000505331 C20orf194Q5TEA3 1177 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms