RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 NCOA4Q13772 614 aa16.93■□□□□ 0.3
DDX41-205ENST00000505081 WDR72Q3MJ13 1102 aa16.93■□□□□ 0.3
DDX41-205ENST00000505081 TLDC1Q6P9B6 456 aa16.93■□□□□ 0.3
DDX41-205ENST00000505081 NIM1KQ8IY84 436 aa16.93■□□□□ 0.3
DDX41-205ENST00000505081 ANKRD35Q8N283 1001 aa16.93■□□□□ 0.3
DDX41-205ENST00000505081 MYLK2Q9H1R3 596 aa16.93■□□□□ 0.3
DDX41-205ENST00000505081 ARHGEF3Q9NR81 526 aa16.93■□□□□ 0.3
DDX41-205ENST00000505081 SCINQ9Y6U3 715 aa16.93■□□□□ 0.3
DDX41-205ENST00000505081 TMEM191CA6NGB0 347 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 TMEM191BP0C7N4 346 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 IL9RQ01113 521 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 RIPK1Q13546 671 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 EFTUD2Q15029 972 aaKnown RBP eCLIP16.92■□□□□ 0.32e-6■■■■■ 32.7
DDX41-205ENST00000505081 ASRGL1Q7L266 308 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 ZBTB33Q86T24 672 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 RTKN2Q8IZC4 609 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 DEPTORQ8TB45 409 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 NSMCE1Q8WV22 266 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 CNTNAP2Q9UHC6 1331 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 RGPD3A6NKT7 1758 aaPredicted RBP16.92■□□□□ 0.3
DDX41-205ENST00000505081 RGPD4Q7Z3J3 1758 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 LRRD1A4D1F6 860 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 POTEJP0CG39 1038 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 MMP8P22894 467 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 RTP1P59025 263 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
DDX41-205ENST00000505081 SLC1A5Q15758 541 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 PPP1R21Q6ZMI0 780 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 SPOCD1Q6ZMY3 1216 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 RELL1Q8IUW5 271 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 ALLCQ8N6M5 410 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 AGBL3Q8NEM8 1001 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 NSUN6Q8TEA1 469 aaKnown RBP16.92■□□□□ 0.3
DDX41-205ENST00000505081 CFAP57Q96MR6 1250 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 TMEM237Q96Q45 408 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 C12orf65Q9H3J6 166 aaKnown RBP16.92■□□□□ 0.3
DDX41-205ENST00000505081 IP6K2Q9UHH9 426 aa16.92■□□□□ 0.3
DDX41-205ENST00000505081 FGFR1P11362 822 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 MSH2P43246 934 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 SMTNL2Q2TAL5 461 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 NBPF12Q5TAG4 269 aaPredicted RBP16.91■□□□□ 0.3
DDX41-205ENST00000505081 TRIM72Q6ZMU5 477 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 TMEM130Q8N3G9 435 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 L3MBTL3Q96JM7 780 aaPredicted RBP16.91■□□□□ 0.3
DDX41-205ENST00000505081 ETNK1Q9HBU6 452 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 TJP2Q9UDY2 1190 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 PHTF1Q9UMS5 762 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 STYXL1Q9Y6J8 313 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 MYH9P35579 1960 aaKnown RBP16.91■□□□□ 0.3
DDX41-205ENST00000505081 ITGBL1O95965 494 aaPredicted RBP16.91■□□□□ 0.3
DDX41-205ENST00000505081 DPEP1P16444 411 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 GBP2P32456 591 aaPredicted RBP16.91■□□□□ 0.3
DDX41-205ENST00000505081 HMGCS2P54868 508 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 PDIA2Q13087 525 aaKnown RBP16.91■□□□□ 0.3
DDX41-205ENST00000505081 EAPPQ56P03 285 aaPredicted RBP16.91■□□□□ 0.3
DDX41-205ENST00000505081 XKR3Q5GH77 459 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 DCUN1D2Q6PH85 259 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 SCARA5Q6ZMJ2 495 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 ERICH1Q86X53 443 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 RCOR2Q8IZ40 523 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 GBP7Q8N8V2 638 aaPredicted RBP16.91■□□□□ 0.3
DDX41-205ENST00000505081 DENND1AQ8TEH3 1009 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 ERP27Q96DN0 273 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 VCPIP1Q96JH7 1222 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 CGRRF1Q99675 332 aa16.91■□□□□ 0.3
DDX41-205ENST00000505081 COL11A1P12107 1806 aaPredicted RBP16.9■□□□□ 0.3
DDX41-205ENST00000505081 SGK1O00141 431 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 SUPT20HL2P0C7V6 817 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 HMGB2P26583 209 aaKnown RBP16.9■□□□□ 0.3
DDX41-205ENST00000505081 TMEM132BQ14DG7 1078 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 SUPT20HL1Q3ZLR7 823 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 RNF43Q68DV7 783 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 REPS2Q8NFH8 660 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 UTP4Q969X6 686 aaKnown RBP16.9■□□□□ 0.3
DDX41-205ENST00000505081 TACO1Q9BSH4 297 aaKnown RBP16.9■□□□□ 0.3
DDX41-205ENST00000505081 A0A0B4J269 797 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 TJP3O95049 919 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 ABHD2P08910 425 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 WEE2P0C1S8 567 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 ALADP13716 330 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 TARSP26639 723 aaKnown RBP16.9■□□□□ 0.3
DDX41-205ENST00000505081 GDF10P55107 478 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 MYL6P60660 151 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
DDX41-205ENST00000505081 KCNT1Q5JUK3 1230 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 DNAJC24Q6P3W2 148 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 SAMD7Q7Z3H4 446 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 MAK16Q9BXY0 300 aaKnown RBP16.9■□□□□ 0.3
DDX41-205ENST00000505081 EBF2Q9HAK2 575 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 ZNF214Q9UL59 606 aaPredicted RBP16.9■□□□□ 0.3
DDX41-205ENST00000505081 CHKBQ9Y259 395 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 ACTL7BQ9Y614 415 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 hCG_1818297A0A087WSY0 165 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 CA4P22748 312 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 CDC25CP30307 473 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 RNASELQ05823 741 aaKnown RBP16.9■□□□□ 0.3
DDX41-205ENST00000505081 RNASEH2BQ5TBB1 312 aaKnown RBP16.9■□□□□ 0.3
DDX41-205ENST00000505081 ANKRD22Q5VYY1 191 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 WDTC1Q8N5D0 677 aa16.9■□□□□ 0.3
DDX41-205ENST00000505081 TFAP2BQ92481 460 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms