RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 BSNDQ8WZ55 320 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 ARHGEF26Q96DR7 871 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 NCAPGQ9BPX3 1015 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 NMRK2Q9NPI5 230 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 RBP3P10745 1247 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 ARHGAP25P42331 645 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 HIRAP54198 1017 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-207ENST00000504761 ADCY2Q08462 1091 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 PAPD7Q5XG87 772 aaKnown RBP14.84□□□□□ -0.03
TCOF1-207ENST00000504761 SLC13A5Q86YT5 568 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-207ENST00000504761 SLC7A14Q8TBB6 771 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 SPATA18Q8TC71 538 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
TCOF1-207ENST00000504761 BAP1Q92560 729 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 LENG9Q96B70 501 aa14.84□□□□□ -0.03
TCOF1-207ENST00000504761 CNTNAP1P78357 1384 aa14.83□□□□□ -0.03
TCOF1-207ENST00000504761 CYB561D2O14569 222 aa14.83□□□□□ -0.03
TCOF1-207ENST00000504761 PSEN2P49810 448 aa14.83□□□□□ -0.03
TCOF1-207ENST00000504761 RGMBQ6NW40 437 aa14.83□□□□□ -0.03
TCOF1-207ENST00000504761 LRRC31Q6UY01 552 aa14.83□□□□□ -0.03
TCOF1-207ENST00000504761 MCUQ8NE86 351 aa14.83□□□□□ -0.03
TCOF1-207ENST00000504761 TLR10Q9BXR5 811 aa14.83□□□□□ -0.03
TCOF1-207ENST00000504761 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.83□□□□□ -0.03
TCOF1-207ENST00000504761 ABI2Q9NYB9 513 aaPredicted RBP14.83□□□□□ -0.03
TCOF1-207ENST00000504761 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.83□□□□□ -0.03
TCOF1-207ENST00000504761 WRAP73Q9P2S5 460 aaPredicted RBP14.83□□□□□ -0.03
TCOF1-207ENST00000504761 STK38LQ9Y2H1 464 aa14.83□□□□□ -0.03
TCOF1-207ENST00000504761 CCDC78A2IDD5 438 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 HMGB1P1B2RPK0 211 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-207ENST00000504761 APOL1O14791 398 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 NKRFO15226 690 aaKnown RBP eCLIP14.83□□□□□ -0.04
TCOF1-207ENST00000504761 LIG3P49916 1009 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 BYSLQ13895 437 aaKnown RBP14.83□□□□□ -0.04
TCOF1-207ENST00000504761 ARHGEF2Q92974 986 aaKnown RBP14.83□□□□□ -0.04
TCOF1-207ENST00000504761 SEPT5Q99719 369 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-207ENST00000504761 HSD3B7Q9H2F3 369 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 GPATCH2LQ9NWQ4 482 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 NFASCO94856 1347 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 SPEF2Q9C093 1822 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 ZSCAN5CA6NGD5 496 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-207ENST00000504761 PCSK1P29120 753 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 LRRC14Q15048 493 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 VPS52Q8N1B4 723 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 ZNF710Q8N1W2 664 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 ANKRD7Q92527 254 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 EXOC4Q96A65 974 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 RAB6BQ9NRW1 208 aa14.83□□□□□ -0.04
TCOF1-207ENST00000504761 MAFO75444 373 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-207ENST00000504761 NCAM1P13591 858 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 GPD1P21695 349 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 NDST1P52848 882 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 DEUP1Q05D60 604 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 ABRAQ8N0Z2 381 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 SOWAHBA6NEL2 793 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 SESN2P58004 480 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-207ENST00000504761 MGAT5BQ3V5L5 792 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 VIRMAQ69YN4 1812 aaKnown RBP14.82□□□□□ -0.04
TCOF1-207ENST00000504761 DEPDC1BQ8WUY9 529 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 MORC2Q9Y6X9 1032 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-207ENST00000504761 DFFAO00273 331 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 GPR182O15218 404 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 FAM200BP0CF97 657 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 MAP7D1Q3KQU3 841 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 FAM47EQ6ZV65 393 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 TMEM176AQ96HP8 235 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 STARD7Q9NQZ5 370 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 DUOX1Q9NRD9 1551 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 PHF20L1A8MW92 1017 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 THP07101 528 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 TPI1P60174 286 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 FBXO47Q5MNV8 452 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 NUGGCQ68CJ6 796 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 NXNQ6DKJ4 435 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 CCDC62Q6P9F0 684 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 SMC1BQ8NDV3 1235 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 MCUR1Q96AQ8 359 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 ERP44Q9BS26 406 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 GANQ9H2C0 597 aa14.82□□□□□ -0.04
TCOF1-207ENST00000504761 H3BRJ5 948 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 AP1G2O75843 785 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 MCF2P10911 925 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 GARSP41250 739 aaKnown RBP14.81□□□□□ -0.04
TCOF1-207ENST00000504761 EPHB1P54762 984 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 GCNT1Q02742 428 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 TERF2Q15554 542 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 KYNUQ16719 465 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 CHADLQ6NUI6 762 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 SLC27A1Q6PCB7 646 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 USP33Q8TEY7 942 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 SKA2Q8WVK7 121 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-207ENST00000504761 LENG1Q96BZ8 264 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-207ENST00000504761 RBM15Q96T37 977 aaKnown RBP eCLIP14.81□□□□□ -0.04
TCOF1-207ENST00000504761 RNPEPQ9H4A4 650 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 VDRP11473 427 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 THOC5Q13769 683 aaKnown RBP14.81□□□□□ -0.04
TCOF1-207ENST00000504761 CLEC16AQ2KHT3 1053 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 MEI1Q5TIA1 1274 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 MMGT1Q8N4V1 131 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 GSDMBQ8TAX9 411 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 EPS8L1Q8TE68 723 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms