RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 PADI3Q9ULW8 664 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 CEP83Q9Y592 693 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 ALG6Q9Y672 507 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 PTCH2Q9Y6C5 1203 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 A0A0U1RQF3 1178 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 TCRBV5S1A1TA0A578 114 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 PTGESO14684 152 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 NCK2O43639 380 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 SRGAP2O75044 1071 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 ITGA4P13612 1032 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 CD58P19256 250 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 AKAP5P24588 427 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 CTNNA2P26232 953 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 PAK2Q13177 524 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 SV2CQ496J9 727 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 TRAF7Q6Q0C0 670 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 SPATA18Q8TC71 538 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 TFAP2BQ92481 460 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 NUP85Q9BW27 656 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 NT5C1AQ9BXI3 368 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 ELOVL4Q9GZR5 314 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 WNT8AQ9H1J5 351 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 SMYD3Q9H7B4 428 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 AGO3Q9H9G7 860 aaKnown RBP14.13□□□□□ -0.15
LMNA-220ENST00000504687 ADAM22Q9P0K1 906 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 TUBGCP4Q9UGJ1 667 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 PARP2Q9UGN5 583 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 STRIP2Q9ULQ0 834 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 PTPN22Q9Y2R2 807 aa14.13□□□□□ -0.15
LMNA-220ENST00000504687 TARSL2A2RTX5 802 aaKnown RBP14.12□□□□□ -0.15
LMNA-220ENST00000504687 KBTBD13C9JR72 458 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 PDE2AO00408 941 aaPredicted RBP14.12□□□□□ -0.15
LMNA-220ENST00000504687 ZNF185O15231 689 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 DDX3YO15523 660 aaKnown RBP14.12□□□□□ -0.15
LMNA-220ENST00000504687 SETSIPP0DME0 302 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 CKBP12277 381 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 H2AFXP16104 143 aaPredicted RBP14.12□□□□□ -0.15
LMNA-220ENST00000504687 BRD2P25440 801 aaKnown RBP14.12□□□□□ -0.15
LMNA-220ENST00000504687 RPL9P32969 192 aaKnown RBP14.12□□□□□ -0.15
LMNA-220ENST00000504687 MAN1A1P33908 653 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 GABRB2P47870 512 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 TAF6P49848 677 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 GUCY2FP51841 1108 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 ELF2Q15723 593 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 LCLAT1Q6UWP7 414 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 SCARA5Q6ZMJ2 495 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 MTERF4Q7Z6M4 381 aaKnown RBP14.12□□□□□ -0.15
LMNA-220ENST00000504687 CRYBG2Q8N1P7 616 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 WDTC1Q8N5D0 677 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 TOP6BLQ8N6T0 577 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 GSTCDQ8NEC7 633 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 SPATA4Q8NEY3 305 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 CPA5Q8WXQ8 436 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 C18orf25Q96B23 403 aaPredicted RBP14.12□□□□□ -0.15
LMNA-220ENST00000504687 PGBD4Q96DM1 585 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 CXCL16Q9H2A7 254 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 STARD7Q9NQZ5 370 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 TRMT13Q9NUP7 481 aaKnown RBP14.12□□□□□ -0.15
LMNA-220ENST00000504687 PARVAQ9NVD7 372 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 WDR35Q9P2L0 1181 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 PUF60Q9UHX1 559 aaKnown RBP14.12□□□□□ -0.15
LMNA-220ENST00000504687 TMEM59LQ9UK28 342 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 RAB21Q9UL25 225 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.12□□□□□ -0.15
LMNA-220ENST00000504687 NOD1Q9Y239 953 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 TRIM17Q9Y577 477 aa14.12□□□□□ -0.15
LMNA-220ENST00000504687 CCDC66A2RUB6 948 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 KPNA7A9QM74 516 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 O00370 1275 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 CLSTN1O94985 981 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 CFHP08603 1231 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 CTSHP09668 335 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 RRM1P23921 792 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 CTNNA1P35221 906 aaKnown RBP14.11□□□□□ -0.15
LMNA-220ENST00000504687 RAP1GAPP47736 663 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 NDST1P52848 882 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 CDH8P55286 799 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 NFX1Q12986 1120 aaKnown RBP14.11□□□□□ -0.15
LMNA-220ENST00000504687 MAMLD1Q13495 774 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 NAA30Q147X3 362 aaPredicted RBP14.11□□□□□ -0.15
LMNA-220ENST00000504687 GLE1Q53GS7 698 aaKnown RBP14.11□□□□□ -0.15
LMNA-220ENST00000504687 SGO2Q562F6 1265 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 PPP1R15BQ5SWA1 713 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 ZNF618Q5T7W0 954 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 CCDC181Q5TID7 509 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 ARHGAP17Q68EM7 881 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 AGMOQ6ZNB7 445 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 UBL4BQ8N7F7 174 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 TWNKQ96RR1 684 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 MIS12Q9H081 205 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 OGDHLQ9ULD0 1010 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 PCDHA3Q9Y5H8 950 aa14.11□□□□□ -0.15
LMNA-220ENST00000504687 TDRD15B5MCY1 1934 aaKnown RBP14.1□□□□□ -0.15
LMNA-220ENST00000504687 KCNK3O14649 394 aa14.1□□□□□ -0.15
LMNA-220ENST00000504687 PPEF2O14830 753 aa14.1□□□□□ -0.15
LMNA-220ENST00000504687 EOMESO95936 686 aa14.1□□□□□ -0.15
LMNA-220ENST00000504687 CALCAP01258 141 aa14.1□□□□□ -0.15
LMNA-220ENST00000504687 THP07101 528 aa14.1□□□□□ -0.15
LMNA-220ENST00000504687 COL6A1P12109 1028 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms