RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 PGLYRP2Q96PD5 576 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 KXD1Q9BQD3 176 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 TBC1D17Q9HA65 648 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 AVENQ9NQS1 362 aaPredicted RBP19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 OLFML3Q9NRN5 406 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 EXOC1Q9NV70 894 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 DACH1Q9UI36 760 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 C2CD2Q9Y426 696 aa19.44■□□□□ 0.7
SQSTM1-209ENST00000504627 PPP1R37O75864 691 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 RHOBTB3O94955 611 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 CEBPBP17676 345 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 ADSSP30520 456 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 POU5F1Q01860 360 aaKnown RBP19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 KCNA1Q09470 495 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 ALCAMQ13740 583 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 DPCR1Q3MIW9 517 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 ANO6Q4KMQ2 910 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 ARMCX5Q6P1M9 558 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 GAS2L3Q86XJ1 694 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 CCDC65Q8IXS2 484 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 MLKLQ8NB16 471 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 STRA6Q9BX79 667 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 NAT10Q9H0A0 1025 aaKnown RBP19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 DPP3Q9NY33 737 aa19.43■□□□□ 0.7
SQSTM1-209ENST00000504627 FRMD3A2A2Y4 597 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 PIRO00625 290 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 IL18RAPO95256 599 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 GPR17Q13304 367 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 KMT5BQ4FZB7 885 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 METTL23Q86XA0 190 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 CCDC105Q8IYK2 499 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 FAM200AQ8TCP9 573 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 NOC3LQ8WTT2 800 aaKnown RBP19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 TCEAL4Q96EI5 215 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 SAAL1Q96ER3 474 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 SHDQ96IW2 340 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 FAM213AQ9BRX8 229 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 ASAH2Q9NR71 780 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 YIPF1Q9Y548 306 aa19.42■□□□□ 0.7
SQSTM1-209ENST00000504627 ANO9A1A5B4 782 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 SPTLC1O15269 473 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 LDHAP00338 332 aaKnown RBP19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 MYL4P12829 197 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 TAF6P49848 677 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 CASP5P51878 434 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 PFKPQ01813 784 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 EHHADHQ08426 723 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 DUSP4Q13115 394 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 PLD1Q13393 1074 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 MYBPC2Q14324 1141 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 CT47A1Q5JQC4 288 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 ZNF658Q5TYW1 1059 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 PHLDB3Q6NSJ2 640 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 CRELD2Q6UXH1 353 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 HS6ST3Q8IZP7 471 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 DTWD2Q8NBA8 298 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 LEMD2Q8NC56 503 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 BPIFA3Q9BQP9 254 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 DNAJC25Q9H1X3 360 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 TMEM206Q9H813 350 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 CEP72Q9P209 647 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 DSEQ9UL01 958 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 SIT1Q9Y3P8 196 aa19.41■□□□□ 0.7
SQSTM1-209ENST00000504627 GOLGA6L3A6NEY3 463 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 CYB561D2O14569 222 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 ECI2O75521 394 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 MICAL2O94851 1124 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 BMP6P22004 513 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 GARTP22102 1010 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 PPP1R2P41236 205 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 ALDH1A3P47895 512 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 EPHB3P54753 998 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 PRSS36Q5K4E3 855 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 C11orf57Q6ZUT1 292 aaPredicted RBP19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 STXBP4Q6ZWJ1 553 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 NT5DC4Q86YG4 428 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 THEM5Q8N1Q8 247 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 SLC27A5Q9Y2P5 690 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 NOTCH4Q99466 2003 aa19.4■□□□□ 0.7
SQSTM1-209ENST00000504627 PRPF6O94906 941 aaKnown RBP19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 CCR2P41597 374 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 ZNF165P49910 485 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 TFAMQ00059 246 aaKnown RBP19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 PSMD2Q13200 908 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 ANGPT1Q15389 498 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 SLC44A4Q53GD3 710 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 COBLL1Q53SF7 1204 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 TANGO2Q6ICL3 276 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 EFCAB13Q8IY85 973 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 PCIF1Q9H4Z3 704 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 SLITRK6Q9H5Y7 841 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 ZFP14Q9HCL3 533 aa19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 RBAKQ9NYW8 714 aaPredicted RBP19.39■□□□□ 0.69
SQSTM1-209ENST00000504627 MTMR11A4FU01 709 aa19.38■□□□□ 0.69
SQSTM1-209ENST00000504627 GOLGA8IPA6NC78 632 aa19.38■□□□□ 0.69
SQSTM1-209ENST00000504627 GOLGA8JA6NMD2 632 aa19.38■□□□□ 0.69
SQSTM1-209ENST00000504627 CYP11A1P05108 521 aa19.38■□□□□ 0.69
SQSTM1-209ENST00000504627 DCNP07585 359 aaKnown RBP19.38■□□□□ 0.69
SQSTM1-209ENST00000504627 STARD6P59095 220 aa19.38■□□□□ 0.69
SQSTM1-209ENST00000504627 PRKCQQ04759 706 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms