RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 CDY1Q9Y6F8 540 aa19.5■□□□□ 0.71
DDR1-252ENST00000504152 SRGAP2BP0DMP2 458 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 TPM4P67936 248 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 ADAM15Q13444 863 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 RAB33AQ14088 237 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 LIMS2Q7Z4I7 341 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.49■□□□□ 0.71
DDR1-252ENST00000504152 DHX40Q8IX18 779 aaKnown RBP19.49■□□□□ 0.71
DDR1-252ENST00000504152 ADGRF2Q8IZF7 708 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 EHBP1Q8NDI1 1231 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 FAXDC2Q96IV6 333 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 SNX25Q9H3E2 840 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 NDST4Q9H3R1 872 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.49■□□□□ 0.71
DDR1-252ENST00000504152 DPP7Q9UHL4 492 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 POLIQ9UNA4 740 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 ATG2AQ2TAZ0 1938 aa19.49■□□□□ 0.71
DDR1-252ENST00000504152 TACC1O75410 805 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 GTF2F1P35269 517 aaKnown RBP eCLIP19.48■□□□□ 0.71
DDR1-252ENST00000504152 GNL1P36915 607 aaPredicted RBP19.48■□□□□ 0.71
DDR1-252ENST00000504152 CLCN4P51793 760 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 ARPP19P56211 112 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 NOP14P78316 857 aaKnown RBP19.48■□□□□ 0.71
DDR1-252ENST00000504152 IQCB1Q15051 598 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 SPOPLQ6IQ16 392 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 SLC8B1Q6J4K2 584 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 ELMSAN1Q6PJG2 1045 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 RSPO2Q6UXX9 243 aaPredicted RBP19.48■□□□□ 0.71
DDR1-252ENST00000504152 EP400NLQ6ZTU2 488 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 SLC22A17Q8WUG5 538 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 ACBD6Q9BR61 282 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 TSPY26PQ9H489 355 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 CBX8Q9HC52 389 aa19.48■□□□□ 0.71
DDR1-252ENST00000504152 DDX43Q9NXZ2 648 aaKnown RBP19.48■□□□□ 0.71
DDR1-252ENST00000504152 PES1O00541 588 aaKnown RBP19.47■□□□□ 0.71
DDR1-252ENST00000504152 GABRDO14764 452 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 ADAM12O43184 909 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 LRRN2O75325 713 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 GLUD1P00367 558 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 WARSP23381 471 aaKnown RBP19.47■□□□□ 0.71
DDR1-252ENST00000504152 LLGL2Q6P1M3 1020 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 TMEM184AQ6ZMB5 413 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 GBP6Q6ZN66 633 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 OR6B3Q8NGW1 331 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 ZNF461Q8TAF7 563 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 CASP10Q92851 521 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 ELMO3Q96BJ8 720 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 PABPC5Q96DU9 382 aaKnown RBP19.47■□□□□ 0.71
DDR1-252ENST00000504152 CYP3A43Q9HB55 503 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 CLDND1Q9NY35 253 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 LIMA1Q9UHB6 759 aaKnown RBP19.47■□□□□ 0.71
DDR1-252ENST00000504152 HCFC2Q9Y5Z7 792 aa19.47■□□□□ 0.71
DDR1-252ENST00000504152 GTPBP10A4D1E9 387 aaKnown RBP19.46■□□□□ 0.71
DDR1-252ENST00000504152 LRRC10BA6NIK2 292 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 GOLGA6L19H0YKK7 550 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 TGM5O43548 720 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 CPB1P15086 417 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 ZNF18P17022 549 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 PCSK1P29120 753 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 CDH8P55286 799 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 TSPY1Q01534 308 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 KCNC3Q14003 757 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 KRT31Q15323 416 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 CTC1Q2NKJ3 1217 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 TPGS2Q68CL5 300 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 LILRA6Q6PI73 481 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 DCP1BQ8IZD4 617 aaKnown RBP19.46■□□□□ 0.71
DDR1-252ENST00000504152 HDAC7Q8WUI4 952 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 TATDN2Q93075 761 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 MRPL45Q9BRJ2 306 aaKnown RBP19.46■□□□□ 0.71
DDR1-252ENST00000504152 NIF3L1Q9GZT8 377 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 VPS16Q9H269 839 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 PLEKHA4Q9H4M7 779 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 APOBEC3GQ9HC16 384 aaKnown RBP19.46■□□□□ 0.71
DDR1-252ENST00000504152 TAB2Q9NYJ8 693 aa19.46■□□□□ 0.71
DDR1-252ENST00000504152 ABLIM3O94929 683 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 PDGFRBP09619 1106 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 WEE2P0C1S8 567 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 SPATA31D3P0C874 917 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 EPCAMP16422 314 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 ELF1P32519 619 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 ZNF445P59923 1031 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 ROR1Q01973 937 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 SMARCB1Q12824 385 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 GPR17Q13304 367 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 EXOC3L4Q17RC7 722 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 MIIPQ5JXC2 388 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 SCARA5Q6ZMJ2 495 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 SPATA31D4Q6ZUB0 917 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 TTC39CQ8N584 583 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 LMO3Q8TAP4 145 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 FAM200AQ8TCP9 573 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 KBTBD7Q8WVZ9 684 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 HLA-CQ95604 372 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 NT5C1BQ96P26 610 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 RTP3Q9BQQ7 232 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 ANP32EQ9BTT0 268 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 BCO2Q9BYV7 579 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 DNAI2Q9GZS0 605 aa19.45■□□□□ 0.7
DDR1-252ENST00000504152 HSD3B7Q9H2F3 369 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms