RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 C3orf20Q8ND61 904 aa5.23□□□□□ -1.57
SUB1-204ENST00000504016 SMG7Q92540 1137 aaKnown RBP5.23□□□□□ -1.57
SUB1-204ENST00000504016 TMEM125Q96AQ2 219 aa5.23□□□□□ -1.57
SUB1-204ENST00000504016 FBXL20Q96IG2 436 aa5.23□□□□□ -1.57
SUB1-204ENST00000504016 C1orf43Q9BWL3 253 aa5.23□□□□□ -1.57
SUB1-204ENST00000504016 KMT5AQ9NQR1 393 aa5.23□□□□□ -1.57
SUB1-204ENST00000504016 PNMA8BQ9ULN7 279 aaPredicted RBP5.23□□□□□ -1.57
SUB1-204ENST00000504016 PCDHA1Q9Y5I3 950 aa5.23□□□□□ -1.57
SUB1-204ENST00000504016 F2RL2O00254 374 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 MTHFD1P11586 935 aaKnown RBP5.22□□□□□ -1.57
SUB1-204ENST00000504016 HSPA6P17066 643 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 LPOP22079 712 aaPredicted RBP5.22□□□□□ -1.57
SUB1-204ENST00000504016 FPGSQ05932 587 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 NOGQ13253 232 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 RAB39AQ14964 217 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 MLC1Q15049 377 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 PABPC1LQ4VXU2 614 aaKnown RBP5.22□□□□□ -1.57
SUB1-204ENST00000504016 ATAT1Q5SQI0 421 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 DACT2Q5SW24 774 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 KIAA0895LQ68EN5 471 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 VWA1Q6PCB0 445 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 SLC4A10Q6U841 1118 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 EPM2AIP1Q7L775 607 aaPredicted RBP5.22□□□□□ -1.57
SUB1-204ENST00000504016 NSUN7Q8NE18 718 aaKnown RBP5.22□□□□□ -1.57
SUB1-204ENST00000504016 PUS7Q96PZ0 661 aaKnown RBP5.22□□□□□ -1.57
SUB1-204ENST00000504016 CGRRF1Q99675 332 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 PACSIN1Q9BY11 444 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 SLC12A5Q9H2X9 1139 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 INTS13Q9NVM9 706 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 STAP2Q9UGK3 403 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 NR2E3Q9Y5X4 410 aa5.22□□□□□ -1.57
SUB1-204ENST00000504016 PRAMEF33A0A0G2JMD5 474 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 A0A1W2PS29 197 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 MPPED1O15442 326 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 TSPAN6O43657 245 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 PRAMEF10O60809 474 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 HAUS5O94927 633 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 AHSGP02765 367 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 SRGNP10124 158 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 GPD1P21695 349 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 PSMC1P62191 440 aaKnown RBP5.21□□□□□ -1.58
SUB1-204ENST00000504016 CLNKQ7Z7G1 428 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 PEG10Q86TG7 708 aaKnown RBP5.21□□□□□ -1.58
SUB1-204ENST00000504016 COL23A1Q86Y22 540 aaPredicted RBP5.21□□□□□ -1.58
SUB1-204ENST00000504016 CELF5Q8N6W0 485 aaKnown RBP5.21□□□□□ -1.58
SUB1-204ENST00000504016 SLC17A8Q8NDX2 589 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 TOR1AIP2Q8NFQ8 470 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 SLC35G2Q8TBE7 412 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 DIS3LQ8TF46 1054 aaKnown RBP5.21□□□□□ -1.58
SUB1-204ENST00000504016 TFAP2BQ92481 460 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 ANKS1AQ92625 1134 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 TNPO1Q92973 898 aaKnown RBP5.21□□□□□ -1.58
SUB1-204ENST00000504016 NUP88Q99567 741 aaPredicted RBP5.21□□□□□ -1.58
SUB1-204ENST00000504016 TIMP4Q99727 224 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 ACO2Q99798 780 aaKnown RBP5.21□□□□□ -1.58
SUB1-204ENST00000504016 TLR10Q9BXR5 811 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 IMPG2Q9BZV3 1241 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 NMRK2Q9NPI5 230 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 MAN1C1Q9NR34 630 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 LMBRD1Q9NUN5 540 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 CALCOCO1Q9P1Z2 691 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 ENTPD2Q9Y5L3 495 aa5.21□□□□□ -1.58
SUB1-204ENST00000504016 CTNND1O60716 968 aaKnown RBP5.2□□□□□ -1.58
SUB1-204ENST00000504016 RFPL1O75677 317 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 GRIA3P42263 894 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 HK3P52790 923 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 MAPK10P53779 464 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 PROK1P58294 105 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 RPS7P62081 194 aaKnown RBP5.2□□□□□ -1.58
SUB1-204ENST00000504016 ZNF844Q08AG5 666 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 LLGL1Q15334 1064 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 NBPF8Q3BBV2 869 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 ARHGAP29Q52LW3 1261 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 TSTD2Q5T7W7 516 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 FAM102BQ5T8I3 360 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 TSHZ1Q6ZSZ6 1077 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 MYO1HQ8N1T3 1032 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 PCSK9Q8NBP7 692 aaKnown RBP5.2□□□□□ -1.58
SUB1-204ENST00000504016 ZBTB34Q8NCN2 500 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 SLC30A5Q8TAD4 765 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 CPA4Q9UI42 421 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 CDYLQ9Y232 598 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 POLHQ9Y253 713 aa5.2□□□□□ -1.58
SUB1-204ENST00000504016 SETD1BQ9UPS6 1966 aaKnown RBP5.2□□□□□ -1.58
SUB1-204ENST00000504016 COL3A1P02461 1466 aaPredicted RBP5.2□□□□□ -1.58
SUB1-204ENST00000504016 NT5C1B-RDH14C9J2C7 533 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 KCNA2P16389 499 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 WT1P19544 449 aaPredicted RBP5.19□□□□□ -1.58
SUB1-204ENST00000504016 GATA3P23771 443 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 PLS1Q14651 629 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 CD300EQ496F6 205 aaPredicted RBP5.19□□□□□ -1.58
SUB1-204ENST00000504016 CCDC93Q567U6 631 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 THEMIS2Q5TEJ8 643 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 B3GNT9Q6UX72 402 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 MICALCLQ6ZW33 695 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 PTF1AQ7RTS3 328 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 PPP1R3BQ86XI6 285 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 IL17RDQ8NFM7 739 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 PLBD2Q8NHP8 589 aa5.19□□□□□ -1.58
SUB1-204ENST00000504016 KLHDC4Q8TBB5 520 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms