RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 IFIH1Q9BYX4 1025 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 FAM96AQ9H5X1 160 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MRPL44Q9H9J2 332 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 GIN1Q9NXP7 522 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 QPCTLQ9NXS2 382 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 BARX2Q9UMQ3 279 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CAPN11Q9UMQ6 739 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ASB3Q9Y575 518 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 A8MXQ7 604 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 M0R2C6 588 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TTI1O43156 1089 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SNX3O60493 162 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 N4BP1O75113 896 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 FKBP6O75344 327 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PEX11BO96011 259 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SSBP05455 408 aaKnown RBP eCLIP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ACPPP15309 386 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CALML3P27482 149 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 GPC3P51654 580 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 NDUFA8P51970 172 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 NUP107P57740 925 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 COPS2P61201 443 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 RELAQ04206 551 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MYBPC3Q14896 1274 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TNIP1Q15025 636 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 KLHDC7AQ5VTJ3 777 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TAPT1Q6NXT6 567 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 VPS37DQ86XT2 251 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PEX5LQ8IYB4 626 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SLC4A11Q8NBS3 891 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DDHD1Q8NEL9 900 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DENND1AQ8TEH3 1009 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PIGOQ8TEQ8 1089 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SCFD1Q8WVM8 642 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 KIFAP3Q92845 792 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DGCR14Q96DF8 476 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 FAM81BQ96LP2 452 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CCDC43Q96MW1 224 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CLIC6Q96NY7 704 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TUBGCP5Q96RT8 1024 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TSEN34Q9BSV6 310 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DESI2Q9BSY9 194 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 RNF39Q9H2S5 420 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 C9orf78Q9NZ63 289 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 LMCD1Q9NZU5 365 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SLC12A4Q9UP95 1085 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 FRMD4BQ9Y2L6 1034 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PGRMC1O00264 195 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PODXLO00592 558 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 FSCN2O14926 492 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 IDH3BO43837 385 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ATP1A2P50993 1020 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 AMPD3Q01432 767 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 GALNT1Q10472 559 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ASPHQ12797 758 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MPP3Q13368 585 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 OTUD1Q5VV17 481 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CDC42EP5Q6NZY7 148 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MSANTD2Q6P1R3 559 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CATIPQ7Z7H3 387 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 NELFCDQ8IXH7 590 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ENDOVQ8N8Q3 282 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ANKLE1Q8NAG6 615 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 BBOF1Q8ND07 529 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 FAM156AQ8NDB6 213 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DQX1Q8TE96 717 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PSPC1Q8WXF1 523 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 RXFP1Q9HBX9 757 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TMBIM4Q9HC24 238 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DIABLOQ9NR28 239 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 IL20Q9NYY1 176 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SAP30BPQ9UHR5 308 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SMG5Q9UPR3 1016 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TMEM265A0A087WTH1 108 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 E9PMD0 336 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 GOLGA8TH3BQL2 631 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SMAPO00193 183 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ETV2O00321 342 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CCDC22O60826 627 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PRSS23O95084 383 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 LATS1O95835 1130 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 GOLGA8HP0CJ92 632 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CFPP27918 469 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PPARGP37231 505 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PLK1P53350 603 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 COPB1P53618 953 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MECOMQ03112 1051 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 BNIP1Q12981 228 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 STRN3Q13033 797 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 FAM110CQ1W6H9 321 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TRMT5Q32P41 509 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 BORAQ6PGQ7 559 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DPH6Q7L8W6 267 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 GLYCTKQ8IVS8 523 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 LCORLQ8N3X6 602 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TDRD5Q8NAT2 981 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CHST13Q8NET6 341 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 APPL2Q8NEU8 664 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TBC1D5Q92609 795 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ZFRQ96KR1 1074 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms