RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ZNF394Q53GI3 561 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 CCDC186Q7Z3E2 898 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 GPIHBP1Q8IV16 184 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 TMEM86AQ8N2M4 240 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 TTC39CQ8N584 583 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 PBX4Q9BYU1 374 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 NUCKS1Q9H1E3 243 aaKnown RBP21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 DSEQ9UL01 958 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 YBX2Q9Y2T7 364 aaKnown RBP21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 GABRDO14764 452 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 GFPT2O94808 682 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 WARSP23381 471 aaKnown RBP21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 TKTP29401 623 aaKnown RBP21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 NDST1P52848 882 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 ARID5BQ14865 1188 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 SFMBT2Q5VUG0 894 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 TAS1R1Q7RTX1 841 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 CEP57Q86XR8 500 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 WHAMMQ8TF30 809 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 VN1R3Q9BXE9 311 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 SNX25Q9H3E2 840 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 ABHD10Q9NUJ1 306 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 AIPL1Q9NZN9 384 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 NME7Q9Y5B8 376 aa21.79■■□□□ 1.08
CDC42SE2-206ENST00000503291 SYN3O14994 580 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 CYP26A1O43174 497 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 TYMPP19971 482 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 FGFR3P22607 806 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 LMO2P25791 158 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 ARID5AQ03989 594 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 E4F1Q66K89 784 aaPredicted RBP21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 OSTM1Q86WC4 334 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 METTL23Q86XA0 190 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 B3GALT6Q96L58 329 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 PPP1R9BQ96SB3 815 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 DNAJC7Q99615 494 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 C17orf80Q9BSJ5 609 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 HMGXB4Q9UGU5 601 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 STXBP5LQ9Y2K9 1186 aa21.78■■□□□ 1.08
CDC42SE2-206ENST00000503291 FGF18O76093 207 aa21.77■■□□□ 1.08
CDC42SE2-206ENST00000503291 PDGFRBP09619 1106 aa21.77■■□□□ 1.08
CDC42SE2-206ENST00000503291 LHX1P48742 406 aa21.77■■□□□ 1.08
CDC42SE2-206ENST00000503291 SPRED2Q7Z698 418 aa21.77■■□□□ 1.08
CDC42SE2-206ENST00000503291 RNF168Q8IYW5 571 aaPredicted RBP21.77■■□□□ 1.08
CDC42SE2-206ENST00000503291 KLHL23Q8NBE8 558 aa21.77■■□□□ 1.08
CDC42SE2-206ENST00000503291 RBBP8NLQ8NC74 664 aaPredicted RBP21.77■■□□□ 1.08
CDC42SE2-206ENST00000503291 SYN2Q92777 582 aaPredicted RBP21.77■■□□□ 1.08
CDC42SE2-206ENST00000503291 TWNKQ96RR1 684 aa21.77■■□□□ 1.08
CDC42SE2-206ENST00000503291 RWDD3Q9Y3V2 267 aa21.77■■□□□ 1.08
CDC42SE2-206ENST00000503291 A8MXQ7 604 aa21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 HCRTO43612 131 aa21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 CTNNB1P35222 781 aa21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 CLCN1P35523 988 aa21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 GSDMDP57764 484 aa21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 KRT17Q04695 432 aa21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 YWHAHQ04917 246 aaPredicted RBP21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 TSR1Q2NL82 804 aaKnown RBP21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 IRF2BP2Q7Z5L9 587 aa21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 DDX53Q86TM3 631 aaKnown RBP21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 UNC93AQ86WB7 457 aa21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 DDX43Q9NXZ2 648 aaKnown RBP21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 MSRAQ9UJ68 235 aa21.77■■□□□ 1.07
CDC42SE2-206ENST00000503291 ZNF132P52740 706 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 RAD23BP54727 409 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 PLCB3Q01970 1234 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 TAP1Q03518 808 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 ORC1Q13415 861 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 USP41Q3LFD5 358 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 OVOS1Q6IE37 1185 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 SPATA18Q8TC71 538 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 NT5C1AQ9BXI3 368 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 ELOVL4Q9GZR5 314 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 ACP6Q9NPH0 428 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 MTUS1Q9ULD2 1270 aa21.76■■□□□ 1.07
CDC42SE2-206ENST00000503291 CHD9Q3L8U1 2897 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 OAZ2O95190 189 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 FERP16591 822 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 HNRNPH3P31942 346 aaKnown RBP21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 RAB30Q15771 203 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 VARS2Q5ST30 1063 aaKnown RBP21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 SMYD5Q6GMV2 418 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 FMNL3Q8IVF7 1028 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 TMEM176AQ96HP8 235 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 TTPALQ9BTX7 342 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 PLVAPQ9BX97 442 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 VWA8A3KMH1 1905 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 SOD2P04179 222 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 ASIC2Q16515 512 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 RTP2Q5QGT7 225 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 WDR59Q6PJI9 974 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 SLC47A2Q86VL8 602 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 SLC4A11Q8NBS3 891 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 PANX2Q96RD6 677 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 TGS1Q96RS0 853 aaKnown RBP21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 RTP3Q9BQQ7 232 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 NKX2-4Q9H2Z4 354 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 CHST7Q9NS84 486 aa21.75■■□□□ 1.07
CDC42SE2-206ENST00000503291 NLRC5Q86WI3 1866 aa21.74■■□□□ 1.07
CDC42SE2-206ENST00000503291 CCDC172P0C7W6 258 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms