RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 PCDH12Q9NPG4 1184 aa12.3□□□□□ -0.44
USP46-204ENST00000503060 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.3□□□□□ -0.44
USP46-204ENST00000503060 MROH7Q68CQ1 1323 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 PYGMP11217 842 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 LIN9Q5TKA1 542 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 DDX42Q86XP3 938 aaKnown RBP eCLIP12.29□□□□□ -0.44
USP46-204ENST00000503060 PASD1Q8IV76 773 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 SEC14L1Q92503 715 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 MAML3Q96JK9 1138 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 EVPLQ92817 2033 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 A0A087WZ62 844 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 HSF2BPO75031 334 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 IL18RAPO95256 599 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 TNNC2P02585 160 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 COL6A1P12109 1028 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 STIP1P31948 543 aaKnown RBP12.29□□□□□ -0.44
USP46-204ENST00000503060 SSTR3P32745 418 aaPredicted RBP12.29□□□□□ -0.44
USP46-204ENST00000503060 RWDD2BP57060 319 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 ZSCAN26Q16670 478 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 PPP1R2P3Q6NXS1 205 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 PLEKHH3Q7Z736 793 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 PHLDB2Q86SQ0 1253 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 PHF13Q86YI8 300 aaPredicted RBP12.29□□□□□ -0.44
USP46-204ENST00000503060 C2orf69Q8N8R5 385 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 ANKRD36BP1Q96IX9 119 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 MPP4Q96JB8 637 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 VCPIP1Q96JH7 1222 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 FDXACB1Q9BRP7 624 aaPredicted RBP12.29□□□□□ -0.44
USP46-204ENST00000503060 C11orf70Q9BRQ4 267 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 TRIM7Q9C029 511 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 BRINP2Q9C0B6 783 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 RPF1Q9H9Y2 349 aaKnown RBP12.29□□□□□ -0.44
USP46-204ENST00000503060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.29□□□□□ -0.44
USP46-204ENST00000503060 ADAM22Q9P0K1 906 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 AKT3Q9Y243 479 aa12.29□□□□□ -0.44
USP46-204ENST00000503060 ZSWIM8A7E2V4 1837 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 GPR25O00155 361 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 DAPK3O43293 454 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 PHF2O75151 1096 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 CAND2O75155 1236 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 SMPD1P17405 629 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 CYP2C19P33261 490 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 AMHR2Q16671 573 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 FAM110CQ1W6H9 321 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 C2CD6Q53TS8 623 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 LLGL2Q6P1M3 1020 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 MTHFD1LQ6UB35 978 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 TMEM192Q8IY95 271 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 PRELID2Q8N945 189 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 ZNF606Q8WXB4 792 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 PTPN18Q99952 460 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 SH3GL2Q99962 352 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 XYLT2Q9H1B5 865 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 PSD3Q9NYI0 1048 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 RABL2AQ9UBK7 228 aaPredicted RBP12.28□□□□□ -0.44
USP46-204ENST00000503060 UTP11Q9Y3A2 253 aaKnown RBP12.28□□□□□ -0.44
USP46-204ENST00000503060 FAM187AA6NFU0 413 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 H3BRB1 525 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 OPA1O60313 960 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 CELF2O95319 508 aaKnown RBP12.28□□□□□ -0.44
USP46-204ENST00000503060 CXCL8P10145 99 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 RBP3P10745 1247 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 MCF2P10911 925 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 CD58P19256 250 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 TMOD1P28289 359 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 HSPA9P38646 679 aaKnown RBP12.28□□□□□ -0.44
USP46-204ENST00000503060 DR1Q01658 176 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 TNFAIP2Q03169 654 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
USP46-204ENST00000503060 DHX34Q14147 1143 aaKnown RBP12.28□□□□□ -0.44
USP46-204ENST00000503060 ZNF699Q32M78 642 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 DUSP28Q4G0W2 176 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 CFAP58Q5T655 872 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 SLC13A5Q86YT5 568 aaPredicted RBP12.28□□□□□ -0.44
USP46-204ENST00000503060 ZDHHC14Q8IZN3 488 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 ZIM3Q96PE6 472 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 PPP1R16BQ96T49 567 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 TINF2Q9BSI4 451 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 TRIM51Q9BSJ1 452 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 RAB17Q9H0T7 212 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 NEUROG2Q9H2A3 272 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 TUT1Q9H6E5 874 aaKnown RBP12.28□□□□□ -0.44
USP46-204ENST00000503060 FAM204AQ9H8W3 233 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 FAM114A2Q9NRY5 505 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 CISHQ9NSE2 258 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 CUEDC1Q9NWM3 386 aaPredicted RBP12.28□□□□□ -0.44
USP46-204ENST00000503060 SUFUQ9UMX1 484 aa12.28□□□□□ -0.44
USP46-204ENST00000503060 MYO1FO00160 1098 aa12.27□□□□□ -0.44
USP46-204ENST00000503060 CSDE1O75534 798 aaKnown RBP12.27□□□□□ -0.44
USP46-204ENST00000503060 RECKO95980 971 aa12.27□□□□□ -0.44
USP46-204ENST00000503060 VTNP04004 478 aa12.27□□□□□ -0.44
USP46-204ENST00000503060 HOXD8P13378 290 aaPredicted RBP12.27□□□□□ -0.44
USP46-204ENST00000503060 CHRNA3P32297 505 aa12.27□□□□□ -0.44
USP46-204ENST00000503060 SLC1A1P43005 524 aa12.27□□□□□ -0.44
USP46-204ENST00000503060 PTP4A2Q12974 167 aa12.27□□□□□ -0.44
USP46-204ENST00000503060 ACVR2BQ13705 512 aa12.27□□□□□ -0.44
USP46-204ENST00000503060 SMYD5Q6GMV2 418 aa12.27□□□□□ -0.44
USP46-204ENST00000503060 MMS22LQ6ZRQ5 1243 aa12.27□□□□□ -0.44
USP46-204ENST00000503060 PLPP6Q8IY26 295 aa12.27□□□□□ -0.44
USP46-204ENST00000503060 IQCKQ8N0W5 287 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms