RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SLC45A4Q5BKX6 768 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 SETD3Q86TU7 594 aaPredicted RBP18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 SNRNP27Q8WVK2 155 aaKnown RBP18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 MED10Q9BTT4 135 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 RAB6BQ9NRW1 208 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 FLT1P17948 1338 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 KIAA0391O15091 583 aaKnown RBP18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 PDE5AO76074 875 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 SGPL1O95470 568 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 IL10P22301 178 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 TMED10P49755 219 aaKnown RBP18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 AP3M2P53677 418 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 KIF19Q2TAC6 998 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 BLOC1S4Q9NUP1 217 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 GTSE1Q9NYZ3 720 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 MAGED2Q9UNF1 606 aaPredicted RBP18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 ACTL7BQ9Y614 415 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 ZBBXA8MT70 800 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 TRIM49D1C9J1S8 452 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 MGRN1O60291 552 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 MED24O75448 989 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 CBX6O95503 412 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 THEMIS2Q5TEJ8 643 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 NDUFAF2Q8N183 169 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 CCNYL1Q8N7R7 359 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 NMD3Q96D46 503 aaKnown RBP18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 OSBPL7Q9BZF2 842 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 NINJ2Q9NZG7 142 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 ARHGAP26Q9UNA1 814 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 IFT172Q9UG01 1749 aa18.03■□□□□ 0.48
HMGXB3-201ENST00000502717 KDM1AO60341 852 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 PTDSS1P48651 473 aaKnown RBP18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 DUPD1Q68J44 220 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 INTS5Q6P9B9 1019 aaKnown RBP18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 MOXD1Q6UVY6 613 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 GALNT4Q8N4A0 578 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 FEZF2Q8TBJ5 459 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 VPS39Q96JC1 886 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 CATSPER2Q96P56 530 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 METTL5Q9NRN9 209 aaKnown RBP18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 SIGLEC1Q9BZZ2 1709 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 DNM1LO00429 736 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 SUPT3HO75486 399 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 BTKQ06187 659 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 LRRC6Q86X45 466 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 DHX38Q92620 1227 aaKnown RBP18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 FAM210AQ96ND0 272 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 PIK3CDO00329 1044 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 GSTA4O15217 222 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 ASNSP08243 561 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 CASP2P42575 452 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 COBLL1Q53SF7 1204 aa18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 MMADHCQ9H3L0 296 aaPredicted RBP18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 RBAKQ9NYW8 714 aaPredicted RBP18.02■□□□□ 0.48
HMGXB3-201ENST00000502717 LOC100653049A0A140TA62 436 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 PFDN6O15212 129 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 KRT34O76011 436 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 RARAP10276 462 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 SDC4P31431 198 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 IL1RL1Q01638 556 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 RRP1BQ14684 758 aaKnown RBP18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 TMEM259Q4ZIN3 620 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 EFHC1Q5JVL4 640 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 PRR5LQ6MZQ0 368 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 LRRC55Q6ZSA7 311 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 PAK5Q9P286 719 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 PCYOX1Q9UHG3 505 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 CDY2AQ9Y6F7 541 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 CDY1Q9Y6F8 540 aa18.02■□□□□ 0.47
HMGXB3-201ENST00000502717 GRIN2DO15399 1336 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 RSPH10B2B2RC85 870 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 LCA5LO95447 670 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 APRTP07741 180 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 RSPH10BP0C881 870 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 ENO3P13929 434 aaPredicted RBP18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 NLRP11P59045 1033 aaKnown RBP18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 TMEM119Q4V9L6 283 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 C1orf228Q6PIY5 440 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 RPF1Q9H9Y2 349 aaKnown RBP18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 BFARQ9NZS9 450 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 WDR35Q9P2L0 1181 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 AGO2Q9UKV8 859 aaKnown RBP18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 AIM2O14862 343 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 FAM200BP0CF97 657 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 PARP6Q2NL67 630 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 GIPC2Q8TF65 315 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 PAFAH2Q99487 392 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 TBC1D10AQ9BXI6 508 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 MRGBPQ9NV56 204 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 PCDHA3Q9Y5H8 950 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 RBAK-RBAKDNI3L0D1 243 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 PYGMP11217 842 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 FRMD8P1Q9BZ68 369 aaPredicted RBP18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 PKD2L2Q9NZM6 624 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 KCNN4O15554 427 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 PSMG1O95456 288 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 MAP4P27816 1152 aaKnown RBP18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 LRRC8EQ6NSJ5 796 aa18.01■□□□□ 0.47
HMGXB3-201ENST00000502717 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms