RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 HLA-DOAP06340 250 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 HLA-EP13747 358 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 GNA15P30679 374 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 YARSP54577 528 aaKnown RBP7.7□□□□□ -1.18
CRNDE-202ENST00000502066 MECOMQ03112 1051 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 LMAN2Q12907 356 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 LRRC24Q50LG9 513 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 C1QL3Q5VWW1 255 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 DBX2Q6ZNG2 339 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 NLRX1Q86UT6 975 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 VGLL2Q8N8G2 317 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 SPATA3Q8NHX4 192 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 ZNF384Q8TF68 577 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 TGFBRAP1Q8WUH2 860 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 DACT3Q96B18 629 aaPredicted RBP7.7□□□□□ -1.18
CRNDE-202ENST00000502066 PCGF6Q9BYE7 350 aa7.7□□□□□ -1.18
CRNDE-202ENST00000502066 NAV1Q8NEY1 1877 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 RBM47A0AV96 593 aaKnown RBP7.69□□□□□ -1.18
CRNDE-202ENST00000502066 VPS37CA5D8V6 355 aaPredicted RBP7.69□□□□□ -1.18
CRNDE-202ENST00000502066 SH3BP5O60239 455 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 ATP9AO75110 1047 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 HOXB7P09629 217 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 STAG3L1P0CL83 205 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 GHRP10912 638 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 ENGP17813 658 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 HOXA6P31267 233 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 VIPR1P32241 457 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 KRT17Q04695 432 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 ATF7IPQ6VMQ6 1270 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 BNC2Q6ZN30 1099 aaPredicted RBP7.69□□□□□ -1.18
CRNDE-202ENST00000502066 CXorf38Q8TB03 319 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 AUTS2Q8WXX7 1259 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 HIC2Q96JB3 615 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 CNTD2Q9H8S5 307 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 RAVER2Q9HCJ3 691 aaKnown RBP7.69□□□□□ -1.18
CRNDE-202ENST00000502066 HOMER2Q9NSB8 354 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 TYW1Q9NV66 732 aaKnown RBP7.69□□□□□ -1.18
CRNDE-202ENST00000502066 KLHL3Q9UH77 587 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 ZMYM5Q9UJ78 669 aa7.69□□□□□ -1.18
CRNDE-202ENST00000502066 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.68□□□□□ -1.18
CRNDE-202ENST00000502066 PLK4O00444 970 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 MPHOSPH10O00566 681 aaKnown RBP7.68□□□□□ -1.18
CRNDE-202ENST00000502066 MAN2B1O00754 1011 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 DCLK1O15075 740 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 AKAP3O75969 853 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 CHRNB1P11230 501 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 CD59P13987 128 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 FGFR2P21802 821 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 TMPRSS3P57727 454 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 PPP2R5BQ15173 497 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 SLC14A2Q15849 920 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 KIAA0753Q2KHM9 967 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 KIAA1614Q5VZ46 1190 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 PDXDC1Q6P996 788 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 EXD3Q8N9H8 876 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 SPATA5Q8NB90 893 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 CHST13Q8NET6 341 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 NUSAP1Q9BXS6 441 aaKnown RBP7.68□□□□□ -1.18
CRNDE-202ENST00000502066 DKK3Q9UBP4 350 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 FBXO40Q9UH90 709 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 ITGB1BP2Q9UKP3 347 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 ZNF281Q9Y2X9 895 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 FLT1P17948 1338 aa7.68□□□□□ -1.18
CRNDE-202ENST00000502066 APCP25054 2843 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 NBASA2RRP1 2371 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 CCDC195A0A1B0GUA6 201 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 WIPF3A6NGB9 483 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 TBKBP1A7MCY6 615 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 PBX3P40426 434 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 TRIM61Q5EBN2 209 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 Q6ZS52 159 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 RTN4RL1Q86UN2 441 aaPredicted RBP7.67□□□□□ -1.18
CRNDE-202ENST00000502066 GALNT15Q8N3T1 639 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 SPATA20Q8TB22 786 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 FAM3CQ92520 227 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 FRMD6Q96NE9 622 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 KXD1Q9BQD3 176 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 VCPKMTQ9H867 229 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 STARD5Q9NSY2 213 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 RBM12Q9NTZ6 932 aaKnown RBP7.67□□□□□ -1.18
CRNDE-202ENST00000502066 LAS1LQ9Y4W2 734 aaKnown RBP7.67□□□□□ -1.18
CRNDE-202ENST00000502066 AK5Q9Y6K8 562 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 F5P12259 2224 aa7.67□□□□□ -1.18
CRNDE-202ENST00000502066 SLC22A31A6NKX4 558 aa7.66□□□□□ -1.18
CRNDE-202ENST00000502066 NKRFO15226 690 aaKnown RBP eCLIP7.66□□□□□ -1.18
CRNDE-202ENST00000502066 LDHCP07864 332 aa7.66□□□□□ -1.18
CRNDE-202ENST00000502066 CELA3BP08861 270 aa7.66□□□□□ -1.18
CRNDE-202ENST00000502066 LAG3P18627 525 aa7.66□□□□□ -1.18
CRNDE-202ENST00000502066 CASTP20810 708 aaKnown RBP7.66□□□□□ -1.18
CRNDE-202ENST00000502066 ATXN3P54252 364 aaPredicted RBP7.66□□□□□ -1.18
CRNDE-202ENST00000502066 KIR3DS1Q14943 382 aa7.66□□□□□ -1.18
CRNDE-202ENST00000502066 PUM3Q15397 648 aaKnown RBP7.66□□□□□ -1.18
CRNDE-202ENST00000502066 C2orf27AQ580R0 203 aa7.66□□□□□ -1.18
CRNDE-202ENST00000502066 CC2D1BQ5T0F9 858 aaKnown RBP7.66□□□□□ -1.18
CRNDE-202ENST00000502066 SPTY2D1Q68D10 685 aaPredicted RBP7.66□□□□□ -1.18
CRNDE-202ENST00000502066 ZPBP2Q6X784 338 aa7.66□□□□□ -1.18
CRNDE-202ENST00000502066 CEP128Q6ZU80 1094 aa7.66□□□□□ -1.18
CRNDE-202ENST00000502066 ERICH6Q7L0X2 663 aa7.66□□□□□ -1.18
CRNDE-202ENST00000502066 PIGKQ92643 395 aa7.66□□□□□ -1.18
CRNDE-202ENST00000502066 ATP6V0A1Q93050 837 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms