RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CNOT1A5YKK6 2376 aaKnown RBP9.94□□□□□ -0.82
CCDC171-209ENST00000498725 SFI1A8K8P3 1242 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 CAVIN2O95810 425 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 FDPSP14324 419 aaKnown RBP9.94□□□□□ -0.82
CCDC171-209ENST00000498725 RPA1P27694 616 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 HOXA6P31267 233 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 NPTX2P47972 431 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 GRSF1Q12849 480 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCDC171-209ENST00000498725 PSMD2Q13200 908 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 TRIM29Q14134 588 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 ZNF174Q15697 407 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 TAF12Q16514 161 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 NAIF1Q69YI7 327 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-209ENST00000498725 MPZL3Q6UWV2 235 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 TAS1R3Q7RTX0 852 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 SYNPOQ8N3V7 929 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 GIPC2Q8TF65 315 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 SEPT5Q99719 369 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-209ENST00000498725 SCNM1Q9BWG6 230 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 EBF3Q9H4W6 596 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 FBRSL1Q9HCM7 1045 aaKnown RBP9.94□□□□□ -0.82
CCDC171-209ENST00000498725 KMT5AQ9NQR1 393 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 KIAA1024Q9UPX6 916 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 PCDHGA5Q9Y5G8 931 aa9.94□□□□□ -0.82
CCDC171-209ENST00000498725 MTMR11A4FU01 709 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 SRRM3A6NNA2 597 aaPredicted RBP9.93□□□□□ -0.82
CCDC171-209ENST00000498725 PATE3B3GLJ2 98 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 SLC16A4O15374 487 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 ATG13O75143 517 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 HIP1RO75146 1068 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 CXCL8P10145 99 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 MCF2P10911 925 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 ARSAP15289 507 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 MCM2P49736 904 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 DGKEP52429 567 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 PLCB2Q00722 1185 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 RAD51AP2Q09MP3 1159 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 RUNX3Q13761 415 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 SLC10A6Q3KNW5 377 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 TMEM196Q5HYL7 178 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 DAB2IPQ5VWQ8 1189 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 OVOS1Q6IE37 1185 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 CENPPQ6IPU0 288 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 TTC30AQ86WT1 665 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 DEFB124Q8NES8 71 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 BEST2Q8NFU1 509 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 RPLP0P6Q8NHW5 317 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 ZCCHC14Q8WYQ9 949 aaKnown RBP9.93□□□□□ -0.82
CCDC171-209ENST00000498725 CHFRQ96EP1 664 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 ZC3H10Q96K80 434 aaKnown RBP9.93□□□□□ -0.82
CCDC171-209ENST00000498725 GCNAQ96QF7 691 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 TPSD1Q9BZJ3 242 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 TM6SF1Q9BZW5 370 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 PTPRHQ9HD43 1115 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 HPS4Q9NQG7 708 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 DDX19AQ9NUU7 478 aaKnown RBP9.93□□□□□ -0.82
CCDC171-209ENST00000498725 MAFFQ9ULX9 164 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 LHX6Q9UPM6 363 aa9.93□□□□□ -0.82
CCDC171-209ENST00000498725 AKAP13Q12802 2813 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 CEP192Q8TEP8 1941 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 LNP1A1A4G5 178 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 BCLAF3A2AJT9 711 aaKnown RBP9.92□□□□□ -0.82
CCDC171-209ENST00000498725 OTOL1A6NHN0 477 aaPredicted RBP9.92□□□□□ -0.82
CCDC171-209ENST00000498725 E9PMD0 336 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 M0QZQ0 153 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 PPEF2O14830 753 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 JAK2O60674 1132 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 RHOBTB1O94844 696 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 LARGE1O95461 756 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 SEC24BO95487 1268 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 OR52Z1P0C646 297 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 NMT1P30419 496 aaKnown RBP9.92□□□□□ -0.82
CCDC171-209ENST00000498725 GALK1P51570 392 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 RING1Q06587 406 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 GPR17Q13304 367 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 DMP1Q13316 513 aaPredicted RBP9.92□□□□□ -0.82
CCDC171-209ENST00000498725 NOLC1Q14978 699 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC171-209ENST00000498725 PTPAQ15257 358 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 MGAT5BQ3V5L5 792 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 SLC39A12Q504Y0 691 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 ARMCX5Q6P1M9 558 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 ITIH5Q86UX2 942 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 MAB21L3Q8N8X9 362 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 KDF1Q8NAX2 398 aaPredicted RBP9.92□□□□□ -0.82
CCDC171-209ENST00000498725 STKLD1Q8NE28 680 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 PSMG2Q969U7 264 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 FAM212AQ96EL1 285 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 SLC46A2Q9BY10 475 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 TASP1Q9H6P5 420 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 TMEM9BQ9NQ34 198 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 OBP2AQ9NY56 170 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 CIZ1Q9ULV3 898 aaPredicted RBP9.92□□□□□ -0.82
CCDC171-209ENST00000498725 CCL26Q9Y258 94 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 ASB3Q9Y575 518 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 PCDHB13Q9Y5F0 798 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 ABCA7Q8IZY2 2146 aa9.92□□□□□ -0.82
CCDC171-209ENST00000498725 SPEGQ15772 3267 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 FAM208BQ5VWN6 2430 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 CCDC163A0A0D9SF12 145 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms