RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 LDHAP00338 332 aaKnown RBP13.21□□□□□ -0.3
AFF3-215ENST00000498090 DRD4P21917 467 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 GRK4P32298 578 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 ITIH4Q14624 930 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 PSMD6Q15008 389 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 TARBP2Q15633 366 aaKnown RBP13.21□□□□□ -0.3
AFF3-215ENST00000498090 MTERF2Q49AM1 385 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 SGO2Q562F6 1265 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 SLFN12LQ6IEE8 588 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 MCOLN2Q8IZK6 566 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 NIFKQ9BYG3 293 aaKnown RBP13.21□□□□□ -0.3
AFF3-215ENST00000498090 FOXP3Q9BZS1 431 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 UPF3AQ9H1J1 476 aaKnown RBP13.21□□□□□ -0.3
AFF3-215ENST00000498090 MRPL47Q9HD33 250 aaKnown RBP13.21□□□□□ -0.3
AFF3-215ENST00000498090 CYP26B1Q9NR63 512 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 ARHGAP28Q9P2N2 729 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 STYXL1Q9Y6J8 313 aa13.21□□□□□ -0.3
AFF3-215ENST00000498090 ZBTB42B2RXF5 422 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 NDC80O14777 642 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 ADAMTS4O75173 837 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 TCEA3O75764 348 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 SHBGP04278 402 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 KRT5P13647 590 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 CETN2P41208 172 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 NSFP46459 744 aaKnown RBP13.2□□□□□ -0.3
AFF3-215ENST00000498090 GJA9P57773 515 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 PTK6Q13882 451 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 ZNF568Q3ZCX4 644 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 SWT1Q5T5J6 900 aaKnown RBP13.2□□□□□ -0.3
AFF3-215ENST00000498090 AADACL2Q6P093 401 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 CCDC50Q8IVM0 306 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 ZDHHC14Q8IZN3 488 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 ZSWIM2Q8NEG5 633 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 CCHCR1Q8TD31 782 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 SH3TC2Q8TF17 1288 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 SNF8Q96H20 258 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 FAM167AQ96KS9 214 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 FNBP1Q96RU3 617 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 AP5M1Q9H0R1 490 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 SEMA4AQ9H3S1 761 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 RNPEPQ9H4A4 650 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 XPNPEP1Q9NQW7 623 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 ANAPC7Q9UJX3 599 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 SCINQ9Y6U3 715 aa13.2□□□□□ -0.3
AFF3-215ENST00000498090 PGK1P00558 417 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 F2P00734 622 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 PIGRP01833 764 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 CYP1A1P04798 512 aaPredicted RBP13.19□□□□□ -0.3
AFF3-215ENST00000498090 CHN1P15882 459 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 TBXAS1P24557 533 aaPredicted RBP13.19□□□□□ -0.3
AFF3-215ENST00000498090 SLC26A2P50443 739 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 SOX10P56693 466 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 NKX3-2P78367 333 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 LMNB2Q03252 620 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 STRN3Q13033 797 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 FSCN1Q16658 493 aaKnown RBP13.19□□□□□ -0.3
AFF3-215ENST00000498090 DGKDQ16760 1214 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 SLC39A4Q6P5W5 647 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 RELL1Q8IUW5 271 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 CCDC197Q8NCU1 140 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 ATL2Q8NHH9 583 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
AFF3-215ENST00000498090 KAT2BQ92831 832 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 BICD1Q96G01 975 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 ZNF317Q96PQ6 595 aaPredicted RBP13.19□□□□□ -0.3
AFF3-215ENST00000498090 INTS9Q9NV88 658 aaKnown RBP13.19□□□□□ -0.3
AFF3-215ENST00000498090 ERAP1Q9NZ08 941 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 BRCA2P51587 3418 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 MYH11P35749 1972 aa13.19□□□□□ -0.3
AFF3-215ENST00000498090 DCDC2CA8MYV0 355 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
AFF3-215ENST00000498090 ABCB7O75027 752 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 DLATP10515 647 aaKnown RBP13.18□□□□□ -0.3
AFF3-215ENST00000498090 RARBP10826 455 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 HNRNPH1P31943 449 aaKnown RBP13.18□□□□□ -0.3
AFF3-215ENST00000498090 LIG4P49917 911 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 CPT1AP50416 773 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 AP3M2P53677 418 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 KRT17Q04695 432 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 CCNG2Q16589 344 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 ZACNQ401N2 412 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 RHBDF2Q6PJF5 856 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 RHOT1Q8IXI2 618 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 CCDC13Q8IYE1 715 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 CCDC89Q8N998 374 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 TRAPPC12Q8WVT3 735 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 ATXN2LQ8WWM7 1075 aaKnown RBP13.18□□□□□ -0.3
AFF3-215ENST00000498090 ABHD8Q96I13 439 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 SELENOSQ9BQE4 189 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 TRAIPQ9BWF2 469 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 DHX33Q9H6R0 707 aaKnown RBP13.18□□□□□ -0.3
AFF3-215ENST00000498090 NRBP2Q9NSY0 501 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 SAMD15Q9P1V8 674 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 TLDC2A0PJX2 215 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 H3BRB1 525 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 CLDN3O15551 220 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 HBP1O60381 514 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 PROSCO94903 275 aa13.18□□□□□ -0.3
AFF3-215ENST00000498090 GSTA1P08263 222 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms