RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OR6B3Q8NGW1 331 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 POF1BQ8WVV4 589 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 KBTBD7Q8WVZ9 684 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 AUTS2Q8WXX7 1259 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 RIN2Q8WYP3 895 aaPredicted RBP14.51□□□□□ -0.09
CPNE1-227ENST00000498056 FAM81BQ96LP2 452 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 KREMEN1Q96MU8 473 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 MRPL45Q9BRJ2 306 aaKnown RBP14.51□□□□□ -0.09
CPNE1-227ENST00000498056 ZBP1Q9H171 429 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 TLR9Q9NR96 1032 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 HMGXB4Q9UGU5 601 aa14.51□□□□□ -0.09
CPNE1-227ENST00000498056 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.5□□□□□ -0.09
CPNE1-227ENST00000498056 EPOPA6NHQ4 379 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 A8MXQ7 604 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 ADCY5O95622 1261 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 PNMA6AP0CW24 399 aaPredicted RBP14.5□□□□□ -0.09
CPNE1-227ENST00000498056 KRT5P13647 590 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 WARSP23381 471 aaKnown RBP14.5□□□□□ -0.09
CPNE1-227ENST00000498056 ACAT1P24752 427 aaKnown RBP14.5□□□□□ -0.09
CPNE1-227ENST00000498056 USP8P40818 1118 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 UBE3AQ05086 875 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 ORC1Q13415 861 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 PSMD5Q16401 504 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 ZNF394Q53GI3 561 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 SPECC1LQ69YQ0 1117 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 PRSS55Q6UWB4 352 aaPredicted RBP14.5□□□□□ -0.09
CPNE1-227ENST00000498056 ENOSF1Q7L5Y1 443 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 TMC7Q7Z402 723 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 OSTM1Q86WC4 334 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 GPIHBP1Q8IV16 184 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 MRFAP1L1Q96HT8 127 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 SPAG5Q96R06 1193 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 TCF25Q9BQ70 676 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 CYP3A43Q9HB55 503 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 CISHQ9NSE2 258 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 DDX43Q9NXZ2 648 aaKnown RBP14.5□□□□□ -0.09
CPNE1-227ENST00000498056 CEP72Q9P209 647 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 STK39Q9UEW8 545 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 LZTS1Q9Y250 596 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 PCDHB4Q9Y5E5 795 aa14.5□□□□□ -0.09
CPNE1-227ENST00000498056 ZNF638Q14966 1978 aaKnown RBP14.49□□□□□ -0.09
CPNE1-227ENST00000498056 GREB1Q4ZG55 1949 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 H3BNC9 293 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 TACC1O75410 805 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 NOL4O94818 638 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 EFEMP2O95967 443 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 CYP11A1P05108 521 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 CPB1P15086 417 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 DNAJB1P25685 340 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 NDST1P52848 882 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 PSMC1P62191 440 aaKnown RBP14.49□□□□□ -0.09
CPNE1-227ENST00000498056 INCA1Q0VD86 236 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 TRIM14Q14142 442 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 CTXN3Q4LDR2 81 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 ZNF697Q5TEC3 545 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 TMEM270Q6UE05 265 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 ANKS3Q6ZW76 656 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 DPH6Q7L8W6 267 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 GLYCTKQ8IVS8 523 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 DRC7Q8IY82 874 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 THEM5Q8N1Q8 247 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 RBBP8NLQ8NC74 664 aaPredicted RBP14.49□□□□□ -0.09
CPNE1-227ENST00000498056 SPPL3Q8TCT6 385 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 LRCH3Q96II8 777 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 FAXDC2Q96IV6 333 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 SYT15Q9BQS2 421 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 ZNF576Q9H609 170 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 MRPL17Q9NRX2 175 aaKnown RBP14.49□□□□□ -0.09
CPNE1-227ENST00000498056 DAAM1Q9Y4D1 1078 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 PCDHGC5Q9Y5F6 944 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 CDH23Q9H251 3354 aa14.49□□□□□ -0.09
CPNE1-227ENST00000498056 OBSL1O75147 1896 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 TMEM265A0A087WTH1 108 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 F8VZ95 297 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 H7C4K7 107 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 RFXAPO00287 272 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 LPXNO60711 386 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 TPM1P09493 284 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 CTSAP10619 480 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 RPL17P18621 184 aaKnown RBP14.48□□□□□ -0.09
CPNE1-227ENST00000498056 PCSK1P29120 753 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 LHX1P48742 406 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 ARPP19P56211 112 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 TSPY1Q01534 308 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 DSG1Q02413 1049 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 SMC1AQ14683 1233 aaKnown RBP14.48□□□□□ -0.09
CPNE1-227ENST00000498056 BMS1Q14692 1282 aaKnown RBP14.48□□□□□ -0.09
CPNE1-227ENST00000498056 DRAP1Q14919 205 aaPredicted RBP14.48□□□□□ -0.09
CPNE1-227ENST00000498056 PTPN14Q15678 1187 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 DPY19L2P1Q6NXN4 242 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 PDXDC1Q6P996 788 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 OR10T2Q8NGX3 314 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 SPATA18Q8TC71 538 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 CPLX3Q8WVH0 158 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 PIK3R5Q8WYR1 880 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 TWNKQ96RR1 684 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 NUP58Q9BVL2 599 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 DPEP3Q9H4B8 488 aa14.48□□□□□ -0.09
CPNE1-227ENST00000498056 BARX2Q9UMQ3 279 aaPredicted RBP14.48□□□□□ -0.09
CPNE1-227ENST00000498056 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms