RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 NPAS3Q8IXF0 933 aa16.51■□□□□ 0.23
NUP50-219ENST00000497960 LRRC52Q8N7C0 313 aa16.51■□□□□ 0.23
NUP50-219ENST00000497960 XXYLT1Q8NBI6 393 aa16.51■□□□□ 0.23
NUP50-219ENST00000497960 LEMD2Q8NC56 503 aa16.51■□□□□ 0.23
NUP50-219ENST00000497960 ING5Q8WYH8 240 aa16.51■□□□□ 0.23
NUP50-219ENST00000497960 BORCS6Q96GS4 357 aa16.51■□□□□ 0.23
NUP50-219ENST00000497960 MTMR12Q9C0I1 747 aa16.51■□□□□ 0.23
NUP50-219ENST00000497960 INTS13Q9NVM9 706 aa16.51■□□□□ 0.23
NUP50-219ENST00000497960 GDE1Q9NZC3 331 aa16.51■□□□□ 0.23
NUP50-219ENST00000497960 YIPF1Q9Y548 306 aa16.51■□□□□ 0.23
NUP50-219ENST00000497960 MTMR11A4FU01 709 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 NARSO43776 548 aaKnown RBP16.5■□□□□ 0.23
NUP50-219ENST00000497960 KLRC4O43908 158 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 HUS1O60921 280 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 MBD3O95983 291 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 SRFP11831 508 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 AVPR2P30518 371 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 EPHB3P54753 998 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 SMARCB1Q12824 385 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 DPYDQ12882 1025 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 PNOCQ13519 176 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 SNRNP35Q16560 246 aaKnown RBP16.5■□□□□ 0.23
NUP50-219ENST00000497960 DUOXA2Q1HG44 320 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 SLC5A9Q2M3M2 681 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 KMT5BQ4FZB7 885 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 CENPPQ6IPU0 288 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 PARM1Q6UWI2 310 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 RDH13Q8NBN7 331 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 ATAD1Q8NBU5 361 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 OR10T2Q8NGX3 314 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 GOLGA5Q8TBA6 731 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 MCRS1Q96EZ8 462 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 FNBP1Q96RU3 617 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 TMEM209Q96SK2 561 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 PRRX2Q99811 253 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 ZCWPW1Q9H0M4 648 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 ASAH2Q9NR71 780 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 CEP72Q9P209 647 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 WNT16Q9UBV4 365 aa16.5■□□□□ 0.23
NUP50-219ENST00000497960 MICAL2O94851 1124 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 VNN2O95498 520 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 RPN1P04843 607 aaKnown RBP16.49■□□□□ 0.23
NUP50-219ENST00000497960 CFHP08603 1231 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 PLA2G5P39877 138 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 VCPP55072 806 aaKnown RBP16.49■□□□□ 0.23
NUP50-219ENST00000497960 MYO1EQ12965 1108 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 SLC39A12Q504Y0 691 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 LMBRD2Q68DH5 695 aaPredicted RBP16.49■□□□□ 0.23
NUP50-219ENST00000497960 WDR49Q8IV35 697 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 DCP1BQ8IZD4 617 aaKnown RBP16.49■□□□□ 0.23
NUP50-219ENST00000497960 SIX5Q8N196 739 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 ST13P5Q8NFI4 369 aaPredicted RBP16.49■□□□□ 0.23
NUP50-219ENST00000497960 C2orf15Q8WU43 125 aaKnown RBP16.49■□□□□ 0.23
NUP50-219ENST00000497960 FGF14Q92915 247 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 HSFX1Q9UBD0 423 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 SLC27A5Q9Y2P5 690 aa16.49■□□□□ 0.23
NUP50-219ENST00000497960 NOTCH4Q99466 2003 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 EXOC3O60645 756 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 SMC2O95347 1197 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 DLATP10515 647 aaKnown RBP16.48■□□□□ 0.23
NUP50-219ENST00000497960 MYL4P12829 197 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 CEBPBP17676 345 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 TNNI1P19237 187 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 PTMSP20962 102 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 RFX1P22670 979 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 TUFMP49411 452 aaKnown RBP16.48■□□□□ 0.23
NUP50-219ENST00000497960 TSPY1Q01534 308 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 STK4Q13043 487 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 PSMD6Q15008 389 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 PRSS36Q5K4E3 855 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 ASTLQ6HA08 431 aaPredicted RBP16.48■□□□□ 0.23
NUP50-219ENST00000497960 C12orf56Q8IXR9 622 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 HS6ST3Q8IZP7 471 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 TMEM86AQ8N2M4 240 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
NUP50-219ENST00000497960 PDCL2Q8N4E4 241 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 FLCNQ8NFG4 579 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 OR5B17Q8NGF7 314 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 CXorf38Q8TB03 319 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 SMARCE1Q969G3 411 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 FAM84AQ96KN4 292 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 RTP3Q9BQQ7 232 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 RPP25Q9BUL9 199 aaKnown RBP16.48■□□□□ 0.23
NUP50-219ENST00000497960 CRISPLD1Q9H336 500 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 GDAP2Q9NXN4 497 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 SIX4Q9UIU6 781 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 ASB3Q9Y575 518 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 SNX9Q9Y5X1 595 aa16.48■□□□□ 0.23
NUP50-219ENST00000497960 STK25O00506 426 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 EPHA5P54756 1037 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 MYL7Q01449 175 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 CYP24A1Q07973 514 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 VEPH1Q14D04 833 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 CAMK4Q16566 473 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 MGAT5BQ3V5L5 792 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 IER5LQ5T953 404 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 ITIH5Q86UX2 942 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 TOP6BLQ8N6T0 577 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 KIAA0895Q8NCT3 520 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms