RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 GNL3LQ9NVN8 582 aaKnown RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 JKAMPQ9P055 326 aa4.15□□□□□ -1.75
PSPC1-205ENST00000497722 FEZ2Q9UHY8 353 aaPredicted RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 MTO1Q9Y2Z2 717 aaKnown RBP4.15□□□□□ -1.75
PSPC1-205ENST00000497722 PRAMEF33A0A0G2JMD5 474 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 LRRC3CA6NJW4 275 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 SLC16A6O15403 523 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 PRAMEF10O60809 474 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 PROP1O75360 226 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 RBMXL2O75526 392 aaKnown RBP4.14□□□□□ -1.75
PSPC1-205ENST00000497722 SUN1O94901 812 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 AGFG2O95081 481 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 PARNO95453 639 aaKnown RBP4.14□□□□□ -1.75
PSPC1-205ENST00000497722 MTHFD1P11586 935 aaKnown RBP4.14□□□□□ -1.75
PSPC1-205ENST00000497722 KCNA2P16389 499 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 GATA3P23771 443 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 SF3B3Q15393 1217 aaKnown RBP4.14□□□□□ -1.75
PSPC1-205ENST00000497722 KHDC1Q4VXA5 237 aaKnown RBP4.14□□□□□ -1.75
PSPC1-205ENST00000497722 EPHA10Q5JZY3 1008 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 UTP14CQ5TAP6 766 aaKnown RBP4.14□□□□□ -1.75
PSPC1-205ENST00000497722 SLC4A10Q6U841 1118 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.14□□□□□ -1.75
PSPC1-205ENST00000497722 DAAM2Q86T65 1068 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 ACTRT2Q8TDY3 377 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 ANKS1AQ92625 1134 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 NELL1Q92832 810 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 C1GALT1C1Q96EU7 318 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 LMBRD1Q9NUN5 540 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 CALCOCO1Q9P1Z2 691 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 SLC45A2Q9UMX9 530 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 FRMD4BQ9Y2L6 1034 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 PCDHA3Q9Y5H8 950 aa4.14□□□□□ -1.75
PSPC1-205ENST00000497722 COL3A1P02461 1466 aaPredicted RBP4.13□□□□□ -1.75
PSPC1-205ENST00000497722 TRGV11A0A075B6L2 103 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 VSTM5A8MXK1 200 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 ERC2O15083 957 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 MPPED1O15442 326 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 CD1AP06126 327 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 ELFN1P0C7U0 828 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 MYBP10242 640 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 DSC2Q02487 901 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 FOXF2Q12947 444 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 DYRK1AQ13627 763 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 ZNF365Q70YC5 407 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 C14orf80Q86SX3 495 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 DENND1CQ8IV53 801 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 TCEAL8Q8IYN2 117 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 MAGEB6Q8N7X4 407 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 TMIEQ8NEW7 156 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 NSUN6Q8TEA1 469 aaKnown RBP4.13□□□□□ -1.75
PSPC1-205ENST00000497722 HPS3Q969F9 1004 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 CDK5RAP3Q96JB5 506 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 TIMP4Q99727 224 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 KLK15Q9H2R5 256 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 FAM204AQ9H8W3 233 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 ARMT1Q9H993 441 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 SARS2Q9NP81 518 aaKnown RBP4.13□□□□□ -1.75
PSPC1-205ENST00000497722 LRIT1Q9P2V4 623 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 ARPP21Q9UBL0 812 aaPredicted RBP4.13□□□□□ -1.75
PSPC1-205ENST00000497722 ABCF2Q9UG63 623 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 DMTF1Q9Y222 760 aa4.13□□□□□ -1.75
PSPC1-205ENST00000497722 ARHGEF17Q96PE2 2063 aaPredicted RBP4.12□□□□□ -1.75
PSPC1-205ENST00000497722 WDR27A2RRH5 827 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 LRRC14BA6NHZ5 514 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 NT5C1B-RDH14C9J2C7 533 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 PROB1E7EW31 1015 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 E9PLN8 166 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 C1RP00736 705 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 CDK4P11802 303 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 WT1P19544 449 aaPredicted RBP4.12□□□□□ -1.75
PSPC1-205ENST00000497722 KCNJ5P48544 419 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 FXR1P51114 621 aaKnown RBP eCLIP4.12□□□□□ -1.75
PSPC1-205ENST00000497722 PROK1P58294 105 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 RPS7P62081 194 aaKnown RBP4.12□□□□□ -1.75
PSPC1-205ENST00000497722 POU6F2P78424 691 aaPredicted RBP4.12□□□□□ -1.75
PSPC1-205ENST00000497722 NOGQ13253 232 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 ATAT1Q5SQI0 421 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 NXNQ6DKJ4 435 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 HEATR3Q7Z4Q2 680 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 CLNKQ7Z7G1 428 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 CFAP52Q8N1V2 620 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 SLC35G2Q8TBE7 412 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 BRIX1Q8TDN6 353 aaKnown RBP4.12□□□□□ -1.75
PSPC1-205ENST00000497722 DIS3LQ8TF46 1054 aaKnown RBP4.12□□□□□ -1.75
PSPC1-205ENST00000497722 LPIN2Q92539 896 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 TNPO1Q92973 898 aaKnown RBP4.12□□□□□ -1.75
PSPC1-205ENST00000497722 VKORC1Q9BQB6 163 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 RSAD1Q9HA92 442 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 PRDM11Q9NQV5 511 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 C1orf112Q9NSG2 853 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 INTS13Q9NVM9 706 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 SLC17A6Q9P2U8 582 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 STXBP5LQ9Y2K9 1186 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 NEU2Q9Y3R4 380 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 ENTPD2Q9Y5L3 495 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 NR2E3Q9Y5X4 410 aa4.12□□□□□ -1.75
PSPC1-205ENST00000497722 WIPF3A6NGB9 483 aa4.11□□□□□ -1.75
PSPC1-205ENST00000497722 PRSS29PA6NIE9 313 aa4.11□□□□□ -1.75
PSPC1-205ENST00000497722 CGB1A6NKQ9 187 aa4.11□□□□□ -1.75
PSPC1-205ENST00000497722 YY2O15391 372 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms