RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ZP2Q05996 745 aa21.48■■□□□ 1.03
CTSD-206ENST00000497544 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.48■■□□□ 1.03
CTSD-206ENST00000497544 METTL23Q86XA0 190 aa21.48■■□□□ 1.03
CTSD-206ENST00000497544 CRACR2AQ9BSW2 395 aa21.48■■□□□ 1.03
CTSD-206ENST00000497544 VN1R3Q9BXE9 311 aa21.48■■□□□ 1.03
CTSD-206ENST00000497544 LMAN2LQ9H0V9 348 aa21.48■■□□□ 1.03
CTSD-206ENST00000497544 RBSNQ9H1K0 784 aa21.48■■□□□ 1.03
CTSD-206ENST00000497544 TLR9Q9NR96 1032 aa21.48■■□□□ 1.03
CTSD-206ENST00000497544 SSX2IPQ9Y2D8 614 aa21.48■■□□□ 1.03
CTSD-206ENST00000497544 LRRN2O75325 713 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 CXCL14O95715 111 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 EFEMP2O95967 443 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 URODP06132 367 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 FGFR3P22607 806 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 TKTP29401 623 aaKnown RBP21.47■■□□□ 1.03
CTSD-206ENST00000497544 CA8P35219 290 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 NOP14P78316 857 aaKnown RBP21.47■■□□□ 1.03
CTSD-206ENST00000497544 FANCCQ00597 558 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 PTPROQ16827 1216 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 EXOC3L4Q17RC7 722 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 SPOPLQ6IQ16 392 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 DPH6Q7L8W6 267 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 RNF168Q8IYW5 571 aaPredicted RBP21.47■■□□□ 1.03
CTSD-206ENST00000497544 ELMO3Q96BJ8 720 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 ENTPD7Q9NQZ7 604 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 MRPL17Q9NRX2 175 aaKnown RBP21.47■■□□□ 1.03
CTSD-206ENST00000497544 FAM86C1Q9NVL1 165 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 DSEQ9UL01 958 aa21.47■■□□□ 1.03
CTSD-206ENST00000497544 TIMM13Q9Y5L4 95 aaPredicted RBP21.47■■□□□ 1.03
CTSD-206ENST00000497544 CSPG5O95196 566 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 CTSAP10619 480 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 TYMPP19971 482 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 DNAJB1P25685 340 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 GLUD2P49448 558 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 ERVFC1P60507 584 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 UBXN1Q04323 297 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 LRMPQ12912 555 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 PDE12Q6L8Q7 609 aaKnown RBP21.46■■□□□ 1.03
CTSD-206ENST00000497544 PDXDC1Q6P996 788 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 APTXQ7Z2E3 356 aaKnown RBP21.46■■□□□ 1.03
CTSD-206ENST00000497544 TOP6BLQ8N6T0 577 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 B3GALT6Q96L58 329 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 NT5C1BQ96P26 610 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 TCF25Q9BQ70 676 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 INTS2Q9H0H0 1204 aaKnown RBP21.46■■□□□ 1.03
CTSD-206ENST00000497544 ZBP1Q9H171 429 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 NGRNQ9NPE2 291 aaKnown RBP21.46■■□□□ 1.03
CTSD-206ENST00000497544 CHST7Q9NS84 486 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 GCNT4Q9P109 453 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 POLIQ9UNA4 740 aa21.46■■□□□ 1.03
CTSD-206ENST00000497544 MYO7AQ13402 2215 aa21.45■■□□□ 1.03
CTSD-206ENST00000497544 CACNA1BQ00975 2339 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 C19orf67A6NJJ6 358 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 LGALS16A8MUM7 142 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 C2CD2LO14523 706 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 UBASH3AP57075 661 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 DSG1Q02413 1049 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 YWHAHQ04917 246 aaPredicted RBP21.45■■□□□ 1.02
CTSD-206ENST00000497544 PUS10Q3MIT2 529 aaKnown RBP21.45■■□□□ 1.02
CTSD-206ENST00000497544 WSCD1Q658N2 575 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 ANKS3Q6ZW76 656 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 TMEM86AQ8N2M4 240 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 LMO3Q8TAP4 145 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 RIN2Q8WYP3 895 aaPredicted RBP21.45■■□□□ 1.02
CTSD-206ENST00000497544 TATDN2Q93075 761 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 APOBEC3GQ9HC16 384 aaKnown RBP21.45■■□□□ 1.02
CTSD-206ENST00000497544 RTN4Q9NQC3 1192 aaKnown RBP21.45■■□□□ 1.02
CTSD-206ENST00000497544 VWA8A3KMH1 1905 aa21.45■■□□□ 1.02
CTSD-206ENST00000497544 PTPRZ1P23471 2315 aaPredicted RBP21.44■■□□□ 1.02
CTSD-206ENST00000497544 H7C4K7 107 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 CYP11A1P05108 521 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 FAM163BP0C2L3 166 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 SLC9A1P19634 815 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 PLCB2Q00722 1185 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 SMC1AQ14683 1233 aaKnown RBP21.44■■□□□ 1.02
CTSD-206ENST00000497544 SOWAHAQ2M3V2 549 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 RTP2Q5QGT7 225 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 VARS2Q5ST30 1063 aaKnown RBP21.44■■□□□ 1.02
CTSD-206ENST00000497544 KIAA0319Q5VV43 1072 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 PLPP4Q5VZY2 271 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 OVOS1Q6IE37 1185 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 ERMP1Q7Z2K6 904 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 THEM5Q8N1Q8 247 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 AUTS2Q8WXX7 1259 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 FAXDC2Q96IV6 333 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 NIF3L1Q9GZT8 377 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 L1RE1Q9UN81 338 aa21.44■■□□□ 1.02
CTSD-206ENST00000497544 H3BQ06 376 aaPredicted RBP21.43■■□□□ 1.02
CTSD-206ENST00000497544 PON1P27169 355 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 KCNMA1Q12791 1236 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 CAMK1Q14012 370 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 SCARA5Q6ZMJ2 495 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 GPR65Q8IYL9 337 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 ADGRF2Q8IZF7 708 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 PDCL2Q8N4E4 241 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 SPATA18Q8TC71 538 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 PIK3R5Q8WYR1 880 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 MRPL38Q96DV4 380 aaKnown RBP21.43■■□□□ 1.02
CTSD-206ENST00000497544 PCMTD1Q96MG8 357 aaPredicted RBP21.43■■□□□ 1.02
CTSD-206ENST00000497544 NAP1L5Q96NT1 182 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms