RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 MSLNQ13421 630 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-215ENST00000497139 USP17L1Q7RTZ2 530 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 REEP2Q9BRK0 252 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 SORCS3Q9UPU3 1222 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 ATP2A1O14983 1001 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 TFAP2AP05549 437 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 DHRS4L1P0CG22 281 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 CLK2P49760 499 aaKnown RBP13.66□□□□□ -0.22
VEGFA-215ENST00000497139 CREB5Q02930 508 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 OVGP1Q12889 678 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 SF3B3Q15393 1217 aaKnown RBP13.66□□□□□ -0.22
VEGFA-215ENST00000497139 SLC15A2Q16348 729 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 PDCD4Q53EL6 469 aaKnown RBP13.66□□□□□ -0.22
VEGFA-215ENST00000497139 SFT2D3Q587I9 215 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 SLFN12Q8IYM2 578 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 ERMNQ8TAM6 284 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 SLC20A1Q8WUM9 679 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 CCDC97Q96F63 343 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-215ENST00000497139 DNAJC1Q96KC8 554 aaKnown RBP13.66□□□□□ -0.22
VEGFA-215ENST00000497139 BRD8Q9H0E9 1235 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 ATRNL1Q5VV63 1379 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 KANSL1LA0AUZ9 987 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 SUPT3HO75486 399 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 GYG1P46976 350 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 TNNI2P48788 182 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 GALK1P51570 392 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 ARL4CP56559 192 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 TRIP13Q15645 432 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-215ENST00000497139 USP41Q3LFD5 358 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 Q6ZNX1 250 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 AHI1Q8N157 1196 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 BANPQ8N9N5 519 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 ICA1LQ8NDH6 482 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 PWWP2AQ96N64 755 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 LBHD1Q9BQE6 289 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-215ENST00000497139 SIKE1Q9BRV8 207 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 ZNF696Q9H7X3 374 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 DNM3Q9UQ16 869 aa13.66□□□□□ -0.22
VEGFA-215ENST00000497139 DNALI1O14645 258 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-215ENST00000497139 ALOX15BO15296 676 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 P4HA2O15460 535 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 TGFB1I1O43294 461 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 ADSSP30520 456 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 STIP1P31948 543 aaKnown RBP13.65□□□□□ -0.22
VEGFA-215ENST00000497139 GSTM4Q03013 218 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 ARHGAP44Q17R89 818 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 EFHC1Q5JVL4 640 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 DHRS4L2Q6PKH6 230 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 ATG4AQ8WYN0 398 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 PIGBQ92521 554 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 CYTH2Q99418 400 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 CORO1BQ9BR76 489 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 NMUR2Q9GZQ4 415 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 BHMT2Q9H2M3 363 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 NHSQ6T4R5 1651 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 ARFGEF1Q9Y6D6 1849 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 SLIT2O94813 1529 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 A0A1W2PPM1 405 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 CCNT2O60583 730 aaKnown RBP13.65□□□□□ -0.22
VEGFA-215ENST00000497139 TBCAO75347 108 aaKnown RBP13.65□□□□□ -0.22
VEGFA-215ENST00000497139 TNFAIP8O95379 198 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 MYL2P10916 166 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 PHBP35232 272 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 AQP4P55087 323 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 KLF1Q13351 362 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-215ENST00000497139 HIC1Q14526 733 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 MORF4L2Q15014 288 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 ADGRD1Q6QNK2 874 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 ALLCQ8N6M5 410 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 TCP10LQ8TDR4 215 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 VPS50Q96JG6 964 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 BIRC8Q96P09 236 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 DHRS4Q9BTZ2 278 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 THTPAQ9BU02 230 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 WWP1Q9H0M0 922 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 SPATA7Q9P0W8 599 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 FRMD4BQ9Y2L6 1034 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 ZNF536O15090 1300 aa13.65□□□□□ -0.22
VEGFA-215ENST00000497139 ITGB4P16144 1822 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 SH3PXD2BA1X283 911 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 TRMUO75648 421 aaKnown RBP13.64□□□□□ -0.23
VEGFA-215ENST00000497139 PDE5AO76074 875 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 USP1O94782 785 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 GCNT3O95395 438 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 MTTPP55157 894 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 CETN1Q12798 172 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 DLG1Q12959 904 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 LPIN1Q14693 890 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 KLHL38Q2WGJ6 581 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 NADK2Q4G0N4 442 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 CBWD6Q4V339 395 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 CBWD3Q5JTY5 395 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 CBWD5Q5RIA9 395 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 SPTY2D1Q68D10 685 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-215ENST00000497139 KLHL35Q6PF15 583 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 PLEKHO2Q8TD55 490 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 DQX1Q8TE96 717 aaKnown RBP13.64□□□□□ -0.23
VEGFA-215ENST00000497139 GDPD5Q8WTR4 605 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 PRR11Q96HE9 360 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms