RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 POLR2EP19388 210 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 EVI2BP34910 448 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MLH1P40692 756 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 CASP7P55210 303 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 ZBTB16Q05516 673 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 STRN3Q13033 797 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MSLNQ13421 630 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 KCNB1Q14721 858 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 GRM3Q14832 879 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 NAA25Q14CX7 972 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TM4SF20Q53R12 229 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 HECTD3Q5T447 861 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 INTS11Q5TA45 600 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 OTUD7BQ6GQQ9 843 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 C8orf74Q6P047 294 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC62Q6P9F0 684 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TUBA3EQ6PEY2 450 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SYDE1Q6ZW31 735 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 LPCAT2Q7L5N7 544 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC9B2Q86UD5 537 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 APLFQ8IW19 511 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SYTL1Q8IYJ3 562 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SPATA5Q8NB90 893 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 OR6C4Q8NGE1 309 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 LMBR1Q8WVP7 490 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 GJA10Q969M2 543 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 COX4I2Q96KJ9 171 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 RPGRIP1Q96KN7 1286 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 FCRL2Q96LA5 508 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 HNRNPABQ99729 332 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 API5Q9BZZ5 524 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MTMR12Q9C0I1 747 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 VPS11Q9H270 941 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MIS18AQ9NYP9 233 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 FNIP2Q9P278 1114 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SCAF8Q9UPN6 1271 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 R3HDM2Q9Y2K5 976 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TAF6LQ9Y6J9 622 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MED1Q15648 1581 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 AATKQ6ZMQ8 1374 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF804BA4D1E1 1349 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ABHD14A-ACY1A0A1B0GW23 586 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ERICH2A1L162 156 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC162PA2VCL2 907 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 C7orf72A4D263 438 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 STMND1H3BQB6 276 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CACNB4O00305 520 aaPredicted RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 HAT1O14929 419 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 RNF113AO15541 343 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CBFA2T3O75081 653 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 DGKIO75912 1065 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 OR5F1O95221 314 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ADCY5O95622 1261 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 NTRK1P04629 796 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC166P0CW27 439 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CDK4P11802 303 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 DNAJB1P25685 340 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 RPL9P32969 192 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 HADHAP40939 763 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ACADSBP45954 432 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 VPS41P49754 854 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SULT1E1P49888 294 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 RARSP54136 660 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 AMPD2Q01433 879 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ACY1Q03154 408 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 RAB3GAP1Q15042 981 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 STK38Q15208 465 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 MAPRE2Q15555 327 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 GPR162Q16538 588 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 MAJINQ3KP22 176 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC40Q4G0X9 1142 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ARHGAP29Q52LW3 1261 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ZBTB41Q5SVQ8 909 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC183Q5T5S1 534 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 NDUFAF5Q5TEU4 345 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 GKAP1Q5VSY0 366 aaPredicted RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ITPRIPL1Q6GPH6 555 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 NEPROQ6NW34 567 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 PPP1R42Q7Z4L9 355 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 STRA8Q7Z7C7 330 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 RNF180Q86T96 592 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 FAM186BQ8IYM0 893 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 BVESQ8NE79 360 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SUPT20HQ8NEM7 779 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC22A8Q8TCC7 542 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 UTP15Q8TED0 518 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 DIS3LQ8TF46 1054 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SGK3Q96BR1 496 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ARL5BQ96KC2 179 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 CABS1Q96KC9 395 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 FAM167AQ96KS9 214 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 TSG101Q99816 390 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 RIOK1Q9BRS2 568 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 ZPBPQ9BS86 351 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 NTPCRQ9BSD7 190 aaKnown RBP3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 MCOLN1Q9GZU1 580 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 DRC3Q9H069 523 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 WNT5BQ9H1J7 359 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 SPTLC3Q9NUV7 552 aa3.32□□□□□ -1.88
SNRNP48-202ENST00000496946 HPF1Q9NWY4 346 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms