RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 DNAJC25-GNG10A0A024R161 153 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 CDC14CA4D256 554 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 GPR25O00155 361 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 NOP56O00567 594 aaKnown RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 ZNF185O15231 689 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 ADCY6O43306 1168 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 GFPT2O94808 682 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 IVLP07476 585 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 ZNF286BP0CG31 522 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 TCF3P15923 654 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 ALOX15P16050 662 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 CXCR5P32302 372 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 FMO5P49326 533 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 GTF2BQ00403 316 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 BIRC3Q13489 604 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 EMC2Q15006 297 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 C1orf220Q5T0J3 134 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 KLHDC7AQ5VTJ3 777 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 PHLDB3Q6NSJ2 640 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 MIS18BP1Q6P0N0 1132 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 PDXDC1Q6P996 788 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 ARMCX2Q7L311 632 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 PCGF5Q86SE9 256 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 PALB2Q86YC2 1186 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 METTL13Q8N6R0 699 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 GPRC5AQ8NFJ5 357 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 POMGNT1Q8WZA1 660 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 CEP295NLQ96MC4 621 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 GAS2L1Q99501 681 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 FAM213AQ9BRX8 229 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 TARS2Q9BW92 718 aaKnown RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 IFIH1Q9BYX4 1025 aaKnown RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 HAPLN2Q9GZV7 340 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 GANQ9H2C0 597 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 SIX2Q9NPC8 291 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 PDLIM7Q9NR12 457 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 DMAC2Q9NW81 257 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 SMARCAL1Q9NZC9 954 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 KCND2Q9NZV8 630 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 ANKFY1Q9P2R3 1169 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 FBXO40Q9UH90 709 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 NOD1Q9Y239 953 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 EMSYQ7Z589 1322 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 A0A0B4J203 849 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 PRSS47A8MTI9 375 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 ANKRD65E5RJM6 399 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 H0Y3Z8 333 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 IGF2BP3O00425 579 aaKnown RBP eCLIP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 MOCS3O95396 460 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 GNA14O95837 355 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 ATP1A1P05023 1023 aaKnown RBP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 GLRA2P23416 452 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 CLNS1AP54105 237 aaKnown RBP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 OSTNP61366 133 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 KLHL30Q0D2K2 578 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 BFSP1Q12934 665 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 SNRNP35Q16560 246 aaKnown RBP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 LRRC23Q53EV4 343 aaPredicted RBP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 XKR3Q5GH77 459 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 IQCEQ6IPM2 695 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 XRRA1Q6P2D8 792 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 FIP1L1Q6UN15 594 aaKnown RBP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 ZNF571Q7Z3V5 609 aaPredicted RBP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 KRT77Q7Z794 578 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 SMYD1Q8NB12 490 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 FAM76AQ8TAV0 307 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 WHAMMQ8TF30 809 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 SLC7A3Q8WY07 619 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 GOLGA1Q92805 767 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 NELL1Q92832 810 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 CDHR1Q96JP9 859 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 CAPZA3Q96KX2 299 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 GPR20Q99678 358 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 RNF19AQ9NV58 838 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 QPCTLQ9NXS2 382 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 PACSIN2Q9UNF0 486 aaPredicted RBP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 GINS2Q9Y248 185 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 WDR37Q9Y2I8 494 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 MAPTP10636 758 aaKnown RBP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 MUTP22033 750 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 CLCN3P51790 818 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 SMTNP53814 917 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 PPP2R3AQ06190 1150 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 BTG3Q14201 252 aaPredicted RBP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 MYBPC3Q14896 1274 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 EPC2Q52LR7 807 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 FIGNQ5HY92 759 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 METTL7BQ6UX53 244 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 IRF2BP2Q7Z5L9 587 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 DPP9Q86TI2 863 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 C2orf69Q8N8R5 385 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 XXYLT1Q8NBI6 393 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 FLCNQ8NFG4 579 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 PRPF31Q8WWY3 499 aaKnown RBP6.57□□□□□ -1.36
SSBP1-213ENST00000496622 SEPT1Q8WYJ6 367 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 SEMA4DQ92854 862 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 JAKMIP2Q96AA8 810 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 TBC1D31Q96DN5 1066 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 UROC1Q96N76 676 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 ACCSQ96QU6 501 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms