RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 CYP11A1P05108 521 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 ACAT1P24752 427 aaKnown RBP10.55□□□□□ -0.72
CALD1-223ENST00000496024 MTHFRP42898 656 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 AP3M2P53677 418 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 TNNC1P63316 161 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 PPP3CAQ08209 521 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 PAK1Q13153 545 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 NCOA4Q13772 614 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 SOWAHAQ2M3V2 549 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 ZNF699Q32M78 642 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 WDR72Q3MJ13 1102 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 SLC39A12Q504Y0 691 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 DCAF17Q5H9S7 520 aaPredicted RBP10.55□□□□□ -0.72
CALD1-223ENST00000496024 TTI2Q6NXR4 508 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 SCARA5Q6ZMJ2 495 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 GPR149Q86SP6 731 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 OSTM1Q86WC4 334 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 ADGRF2Q8IZF7 708 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 TRIML1Q8N9V2 468 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 OR10T2Q8NGX3 314 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 ZNF461Q8TAF7 563 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 HDAC7Q8WUI4 952 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 SUSD6Q92537 303 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 DUSP9Q99956 384 aaKnown RBP10.55□□□□□ -0.72
CALD1-223ENST00000496024 RTP3Q9BQQ7 232 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 MKNK1Q9BUB5 465 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 COL25A1Q9BXS0 654 aaPredicted RBP10.55□□□□□ -0.72
CALD1-223ENST00000496024 POMKQ9H5K3 350 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 GDAP2Q9NXN4 497 aa10.55□□□□□ -0.72
CALD1-223ENST00000496024 MYO10Q9HD67 2058 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 BICDL2A1A5D9 508 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 IKBKBO14920 756 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 SLC16A3O15427 465 aaKnown RBP10.54□□□□□ -0.72
CALD1-223ENST00000496024 HLA-DRAP01903 254 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 PDGFRBP09619 1106 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 ATF2P15336 505 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 PIK3CAP42336 1068 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 CLDN10P78369 228 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 NTHL1P78549 312 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 MYL7Q01449 175 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 DUSP4Q13115 394 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 ZACNQ401N2 412 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 CCDC40Q4G0X9 1142 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 TPGS2Q68CL5 300 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 CCDC149Q6ZUS6 474 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 CREBRFQ8IUR6 639 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 TOP6BLQ8N6T0 577 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 SYAP1Q96A49 352 aaPredicted RBP10.54□□□□□ -0.72
CALD1-223ENST00000496024 ZNF707Q96C28 371 aaPredicted RBP10.54□□□□□ -0.72
CALD1-223ENST00000496024 PI4K2AQ9BTU6 479 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 PHF7Q9BWX1 381 aaPredicted RBP10.54□□□□□ -0.72
CALD1-223ENST00000496024 OXCT2Q9BYC2 517 aaPredicted RBP10.54□□□□□ -0.72
CALD1-223ENST00000496024 PRKD2Q9BZL6 878 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 DDX43Q9NXZ2 648 aaKnown RBP10.54□□□□□ -0.72
CALD1-223ENST00000496024 ARMCX3Q9UH62 379 aaPredicted RBP10.54□□□□□ -0.72
CALD1-223ENST00000496024 AFF4Q9UHB7 1163 aaKnown RBP10.54□□□□□ -0.72
CALD1-223ENST00000496024 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
CALD1-223ENST00000496024 MTMR11A4FU01 709 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 ATP2C2O75185 946 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 SOAT2O75908 522 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 VNN2O95498 520 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 MBD3O95983 291 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 C1RP00736 705 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 LRG1P02750 347 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 ATICP31939 592 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 RAP1GAPP47736 663 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 TSPY1Q01534 308 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 ZP2Q05996 745 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 GPR17Q13304 367 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 DPCR1Q3MIW9 517 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 ZNF667Q5HYK9 610 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 SPOPLQ6IQ16 392 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 C15orf39Q6ZRI6 1047 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 GRASPQ7Z6J2 395 aaPredicted RBP10.53□□□□□ -0.72
CALD1-223ENST00000496024 LRRTM3Q86VH5 581 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 ADHFE1Q8IWW8 467 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 ZC3H3Q8IXZ2 948 aaKnown RBP10.53□□□□□ -0.72
CALD1-223ENST00000496024 DCP1BQ8IZD4 617 aaKnown RBP10.53□□□□□ -0.72
CALD1-223ENST00000496024 GJD3Q8N144 294 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 TMEM86AQ8N2M4 240 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 TTC9BQ8N6N2 239 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 ATAD1Q8NBU5 361 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 CMASQ8NFW8 434 aaPredicted RBP10.53□□□□□ -0.72
CALD1-223ENST00000496024 OR6B3Q8NGW1 331 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 TAS1R2Q8TE23 839 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 CEP63Q96MT8 703 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 NECTIN4Q96NY8 510 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 MRPL45Q9BRJ2 306 aaKnown RBP10.53□□□□□ -0.72
CALD1-223ENST00000496024 SRRTQ9BXP5 876 aaKnown RBP10.53□□□□□ -0.72
CALD1-223ENST00000496024 ZCWPW1Q9H0M4 648 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 XYLT2Q9H1B5 865 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 SNX25Q9H3E2 840 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 SMYD3Q9H7B4 428 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 TMEM8AQ9HCN3 771 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 CD320Q9NPF0 282 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 HCFC1R1Q9NWW0 138 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 ZDHHC7Q9NXF8 308 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 ABI2Q9NYB9 513 aaPredicted RBP10.53□□□□□ -0.72
CALD1-223ENST00000496024 INSL5Q9Y5Q6 135 aa10.53□□□□□ -0.72
CALD1-223ENST00000496024 DLL1O00548 723 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms