RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 NPHP3-ACAD11A0A0J9YXS1 232 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.95□□□□□ -1.62
VPS52-222ENST00000495981 FAM95CA0A1B0GW59 222 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 TMEM82A0PJX8 343 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 C7orf72A4D263 438 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 LINC01553A4QN01 128 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 GPAA1O43292 621 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 SYPP08247 313 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 IFIT2P09913 472 aaKnown RBP4.95□□□□□ -1.62
VPS52-222ENST00000495981 BMP3P12645 472 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 PAMP19021 973 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 ADMP35318 185 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 ST3GAL2Q16842 350 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 GAB4Q2WGN9 574 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 SBK1Q52WX2 424 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 COBLL1Q53SF7 1204 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 SNRNP48Q6IEG0 339 aaKnown RBP4.95□□□□□ -1.62
VPS52-222ENST00000495981 ESRP1Q6NXG1 681 aaKnown RBP4.95□□□□□ -1.62
VPS52-222ENST00000495981 CHST15Q7LFX5 561 aaPredicted RBP4.95□□□□□ -1.62
VPS52-222ENST00000495981 KSR1Q8IVT5 923 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 Q8N1Y9 231 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 MFSD4AQ8N468 514 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 TMEM105Q8N8V8 129 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 FAM133AQ8N9E0 248 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 ZNF610Q8N9Z0 462 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 TMEM52Q8NDY8 209 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 GMCL1P1Q8NEA9 526 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 SLC35G2Q8TBE7 412 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 SH3RF2Q8TEC5 729 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 WFDC12Q8WWY7 111 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 JADE3Q92613 823 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 CEP95Q96GE4 821 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 MEGF10Q96KG7 1140 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 GLT1D1Q96MS3 346 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 YIPF2Q9BWQ6 316 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 JAM3Q9BX67 310 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.95□□□□□ -1.623e-7■■■■□ 22.2
VPS52-222ENST00000495981 MAF1Q9H063 256 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 MTIF3Q9H2K0 278 aaKnown RBP4.95□□□□□ -1.62
VPS52-222ENST00000495981 SLC38A10Q9HBR0 1119 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 A1CFQ9NQ94 594 aaKnown RBP4.95□□□□□ -1.62
VPS52-222ENST00000495981 TRMT13Q9NUP7 481 aaKnown RBP4.95□□□□□ -1.62
VPS52-222ENST00000495981 AP5S1Q9NUS5 200 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 NYAP2Q9P242 653 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 DDX19BQ9UMR2 479 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 DAAM1Q9Y4D1 1078 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 SLC4A4Q9Y6R1 1079 aa4.95□□□□□ -1.62
VPS52-222ENST00000495981 FRMPD2Q68DX3 1309 aaPredicted RBP4.95□□□□□ -1.62
VPS52-222ENST00000495981 LAMA5O15230 3695 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 KLHL33A6NCF5 533 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 F5H6K3 240 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 KCNK3O14649 394 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 LINC01565O15544 149 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 MBTPS2O43462 519 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 XPOTO43592 962 aaKnown RBP4.94□□□□□ -1.62
VPS52-222ENST00000495981 DUSP11O75319 330 aaKnown RBP4.94□□□□□ -1.62
VPS52-222ENST00000495981 HMMRO75330 724 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 IL33O95760 270 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 FGAP02671 866 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 APPP05067 770 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 PTX3P26022 381 aaPredicted RBP4.94□□□□□ -1.62
VPS52-222ENST00000495981 BCL6P41182 706 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 OAZ1P54368 228 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 GJA9P57773 515 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 KLRC3Q07444 240 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 LSAMPQ13449 338 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 ZNF267Q14586 743 aaPredicted RBP4.94□□□□□ -1.62
VPS52-222ENST00000495981 ACAP1Q15027 740 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 SEC23AQ15436 765 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 CLEC16AQ2KHT3 1053 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 UVSSAQ2YD98 709 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 ARHGAP29Q52LW3 1261 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 C20orf194Q5TEA3 1177 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 ZPBP2Q6X784 338 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 EP400NLQ6ZTU2 488 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 ARMCX2Q7L311 632 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 TLK2Q86UE8 772 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 TSPYL5Q86VY4 417 aaPredicted RBP4.94□□□□□ -1.62
VPS52-222ENST00000495981 SUGP1Q8IWZ8 645 aaKnown RBP4.94□□□□□ -1.62
VPS52-222ENST00000495981 RPAP2Q8IXW5 612 aaPredicted RBP4.94□□□□□ -1.62
VPS52-222ENST00000495981 KIAA2013Q8IYS2 634 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 KIAA1958Q8N8K9 716 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 KBTBD3Q8NAB2 608 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 PHOSPHO2Q8TCD6 241 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 PABPC5Q96DU9 382 aaKnown RBP4.94□□□□□ -1.62
VPS52-222ENST00000495981 SCYL1Q96KG9 808 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 KCNJ15Q99712 375 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 FOXP3Q9BZS1 431 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 ZDHHC5Q9C0B5 715 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 UBA5Q9GZZ9 404 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 CATSPERZQ9NTU4 200 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 DLL3Q9NYJ7 618 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 ZHX1Q9UKY1 873 aaPredicted RBP4.94□□□□□ -1.62
VPS52-222ENST00000495981 FAM50BQ9Y247 325 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 CNPY2Q9Y2B0 182 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS52-222ENST00000495981 TIMM13Q9Y5L4 95 aaPredicted RBP4.94□□□□□ -1.62
VPS52-222ENST00000495981 MROH7Q68CQ1 1323 aa4.94□□□□□ -1.62
VPS52-222ENST00000495981 KIAA1217Q5T5P2 1943 aa4.93□□□□□ -1.62
VPS52-222ENST00000495981 SLC12A8A0AV02 714 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms