RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 PSMG2Q969U7 264 aa19.9■□□□□ 0.78
CLCNKA-207ENST00000495784 DNAJC19Q96DA6 116 aa19.9■□□□□ 0.78
CLCNKA-207ENST00000495784 INTS4Q96HW7 963 aaKnown RBP19.9■□□□□ 0.78
CLCNKA-207ENST00000495784 SEPT5Q99719 369 aaPredicted RBP19.9■□□□□ 0.78
CLCNKA-207ENST00000495784 FAM213AQ9BRX8 229 aa19.9■□□□□ 0.78
CLCNKA-207ENST00000495784 ZCWPW1Q9H0M4 648 aa19.9■□□□□ 0.78
CLCNKA-207ENST00000495784 PIAS3Q9Y6X2 628 aa19.9■□□□□ 0.78
CLCNKA-207ENST00000495784 KCNA1Q09470 495 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 SV2CQ496J9 727 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 L1TD1Q5T7N2 865 aaKnown RBP19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 NT5DC4Q86YG4 428 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 EFCAB13Q8IY85 973 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 SYCP3Q8IZU3 236 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 FAM3CQ92520 227 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 ZNF560Q96MR9 790 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 USP28Q96RU2 1077 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 STRA6Q9BX79 667 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 PANK2Q9BZ23 570 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 ATXN3LQ9H3M9 355 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 FOXD4L1Q9NU39 408 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 MTMR6Q9Y217 621 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 PCDHB13Q9Y5F0 798 aa19.89■□□□□ 0.77
CLCNKA-207ENST00000495784 SHISA7A6NL88 538 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 GABRR2P28476 465 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 TFAMQ00059 246 aaKnown RBP19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 ALCAMQ13740 583 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 SLC39A14Q15043 492 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 TAF12Q16514 161 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 ARHGAP15Q53QZ3 475 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 STXBP5Q5T5C0 1151 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 WSCD1Q658N2 575 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 ARID3BQ8IVW6 561 aaPredicted RBP19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 CSGALNACT1Q8TDX6 532 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 ATRIPQ8WXE1 791 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 ZSCAN16Q9H4T2 348 aaPredicted RBP19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 OLFML3Q9NRN5 406 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 PCDHGA2Q9Y5H1 932 aa19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 EP300Q09472 2414 aaPredicted RBP19.88■□□□□ 0.77
CLCNKA-207ENST00000495784 NCANO14594 1321 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 SPTBN4Q9H254 2564 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 KPNA7A9QM74 516 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 DPYSL4O14531 572 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 PNPLA4P41247 253 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 CDR1P51861 262 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 SMARCB1Q12824 385 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 MTAPQ13126 283 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 FZD5Q13467 585 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 GPR158Q5T848 1215 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 GAREM2Q75VX8 874 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 BRSK2Q8IWQ3 736 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 C2orf15Q8WU43 125 aaKnown RBP19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 RUBCNQ92622 972 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 RSPRY1Q96DX4 576 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 SAAL1Q96ER3 474 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 BORCS6Q96GS4 357 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 GCNAQ96QF7 691 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 LPIN3Q9BQK8 851 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 PANK4Q9NVE7 773 aa19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 RBAKQ9NYW8 714 aaPredicted RBP19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 MORC2Q9Y6X9 1032 aaPredicted RBP19.87■□□□□ 0.77
CLCNKA-207ENST00000495784 CHADO15335 359 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 LDHAP00338 332 aaKnown RBP19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 GARTP22102 1010 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 ID4P47928 161 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 CASP5P51878 434 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 STK38Q15208 465 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 TSSK4Q6SA08 328 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 GPIHBP1Q8IV16 184 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 DCP1BQ8IZD4 617 aaKnown RBP19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 PDILTQ8N807 584 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 SPPL2BQ8TCT7 592 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 NOC3LQ8WTT2 800 aaKnown RBP19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 CACTINQ8WUQ7 758 aaKnown RBP19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 CHRDQ9H2X0 955 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 ZSCAN32Q9NX65 697 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 ABI2Q9NYB9 513 aaPredicted RBP19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 ANK1P16157 1881 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 TSC2P49815 1807 aa19.86■□□□□ 0.77
CLCNKA-207ENST00000495784 A0A087X0B3 334 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 ARNTLO00327 626 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 STX6O43752 255 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 ITGB3P05106 788 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 ATF6P18850 670 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 CCNE1P24864 410 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 CDC25CP30307 473 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 POLR2BP30876 1174 aaKnown RBP19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 KPNA1P52294 538 aaPredicted RBP19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 TSPY1Q01534 308 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 FCHO2Q0JRZ9 810 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 C1orf228Q6PIY5 440 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 LRRTM3Q86VH5 581 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 CCDC65Q8IXS2 484 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 KIAA2013Q8IYS2 634 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 ZNF687Q8N1G0 1237 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 SUMF1Q8NBK3 374 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 MSANTD3Q96H12 275 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 IER2Q9BTL4 223 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 TASP1Q9H6P5 420 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 TMEM206Q9H813 350 aa19.85■□□□□ 0.77
CLCNKA-207ENST00000495784 LMAN1LQ9HAT1 526 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms