RNA–Protein interactions for RNA: ENST00000495546.1

C2orf88-209, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 387 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-209ENST00000495546 BPIFA3Q9BQP9 254 aa16.55■□□□□ 0.24
C2orf88-209ENST00000495546 APOBEC3GQ9HC16 384 aaKnown RBP16.55■□□□□ 0.24
C2orf88-209ENST00000495546 PRDM6Q9NQX0 595 aa16.55■□□□□ 0.24
C2orf88-209ENST00000495546 SAMSN1Q9NSI8 373 aaKnown RBP16.55■□□□□ 0.24
C2orf88-209ENST00000495546 RAB20Q9NX57 234 aa16.55■□□□□ 0.24
C2orf88-209ENST00000495546 FBXW11Q9UKB1 542 aa16.55■□□□□ 0.24
C2orf88-209ENST00000495546 BARX2Q9UMQ3 279 aaPredicted RBP16.55■□□□□ 0.24
C2orf88-209ENST00000495546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.55■□□□□ 0.24
C2orf88-209ENST00000495546 P4HA2O15460 535 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 N4BP1O75113 896 aaKnown RBP16.54■□□□□ 0.24
C2orf88-209ENST00000495546 WARSP23381 471 aaKnown RBP16.54■□□□□ 0.24
C2orf88-209ENST00000495546 ASPAP45381 313 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 TNNC1P63316 161 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 MYL5Q02045 173 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 KCNH2Q12809 1159 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 SKIV2LQ15477 1246 aaKnown RBP16.54■□□□□ 0.24
C2orf88-209ENST00000495546 ZNF667Q5HYK9 610 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 SPOPLQ6IQ16 392 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 ANKRD54Q6NXT1 300 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 LLGL2Q6P1M3 1020 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 SYCE2Q6PIF2 218 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 PALB2Q86YC2 1186 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 FAM114A1Q8IWE2 563 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 ADGRF2Q8IZF7 708 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 ZNF461Q8TAF7 563 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 HDAC7Q8WUI4 952 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 ELMO3Q96BJ8 720 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 TMEM209Q96SK2 561 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 PI4K2AQ9BTU6 479 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 HSD3B7Q9H2F3 369 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 POLIQ9UNA4 740 aa16.54■□□□□ 0.24
C2orf88-209ENST00000495546 SLC34A2O95436 690 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 VNN2O95498 520 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 AFPP02771 609 aaKnown RBP16.53■□□□□ 0.24
C2orf88-209ENST00000495546 LHX1P48742 406 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 NOP14P78316 857 aaKnown RBP16.53■□□□□ 0.24
C2orf88-209ENST00000495546 MYL7Q01449 175 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 GPR17Q13304 367 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 TPGS2Q68CL5 300 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 KREMEN2Q8NCW0 462 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 LMO3Q8TAP4 145 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 MMS19Q96T76 1030 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 PKMYT1Q99640 499 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 ACBD6Q9BR61 282 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 MRPL45Q9BRJ2 306 aaKnown RBP16.53■□□□□ 0.24
C2orf88-209ENST00000495546 BCO2Q9BYV7 579 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 ZCWPW1Q9H0M4 648 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 PLEKHA4Q9H4M7 779 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 DZANK1Q9NVP4 752 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 DDX43Q9NXZ2 648 aaKnown RBP16.53■□□□□ 0.24
C2orf88-209ENST00000495546 NXF1Q9UBU9 619 aaKnown RBP16.53■□□□□ 0.24
C2orf88-209ENST00000495546 NME7Q9Y5B8 376 aa16.53■□□□□ 0.24
C2orf88-209ENST00000495546 OR4Q2P0C623 313 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 SRGAP2BP0DMP2 458 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 ATF2P15336 505 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 HOXB8P17481 243 aaPredicted RBP16.52■□□□□ 0.24
C2orf88-209ENST00000495546 EEF1GP26641 437 aaKnown RBP16.52■□□□□ 0.24
C2orf88-209ENST00000495546 TCP11X2Q5H9J9 407 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 MIIPQ5JXC2 388 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 THEM5Q8N1Q8 247 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 IMPG2Q9BZV3 1241 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 NIF3L1Q9GZT8 377 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 NAT10Q9H0A0 1025 aaKnown RBP16.52■□□□□ 0.24
C2orf88-209ENST00000495546 SDCBP2Q9H190 292 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 S1PR5Q9H228 398 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 SMYD3Q9H7B4 428 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 MAN1C1Q9NR34 630 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 FANCLQ9NW38 375 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 AFF4Q9UHB7 1163 aaKnown RBP16.52■□□□□ 0.24
C2orf88-209ENST00000495546 MAFFQ9ULX9 164 aa16.52■□□□□ 0.24
C2orf88-209ENST00000495546 KCNJ18B7U540 433 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 HCRTO43612 131 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 SPATA31D3P0C874 917 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 ZNF18P17022 549 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 KCNA5P22460 613 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 LMO2P25791 158 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 MTIF2P46199 727 aaKnown RBP16.51■□□□□ 0.23
C2orf88-209ENST00000495546 KCNJ12Q14500 433 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 MAN2A1Q16706 1144 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 LEXMQ3ZCV2 418 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 HSP90AA4PQ58FG1 418 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 RNF19BQ6ZMZ0 732 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 SPATA31D4Q6ZUB0 917 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 LRRTM3Q86VH5 581 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 DHX40Q8IX18 779 aaKnown RBP16.51■□□□□ 0.23
C2orf88-209ENST00000495546 TCEAL8Q8IYN2 117 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 SMRP1Q8NCR6 262 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 CMASQ8NFW8 434 aaPredicted RBP16.51■□□□□ 0.23
C2orf88-209ENST00000495546 TUBGCP2Q9BSJ2 902 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 THEGQ9P2T0 379 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 DPP7Q9UHL4 492 aa16.51■□□□□ 0.23
C2orf88-209ENST00000495546 GTPBP10A4D1E9 387 aaKnown RBP16.5■□□□□ 0.23
C2orf88-209ENST00000495546 MTMR11A4FU01 709 aa16.5■□□□□ 0.23
C2orf88-209ENST00000495546 H3BQ06 376 aaPredicted RBP16.5■□□□□ 0.23
C2orf88-209ENST00000495546 ZMYND10O75800 440 aa16.5■□□□□ 0.23
C2orf88-209ENST00000495546 SEC24AO95486 1093 aa16.5■□□□□ 0.23
C2orf88-209ENST00000495546 P4HA1P13674 534 aa16.5■□□□□ 0.23
C2orf88-209ENST00000495546 CPB1P15086 417 aa16.5■□□□□ 0.23
C2orf88-209ENST00000495546 ACAT1P24752 427 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms