RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 LZTFL1Q9NQ48 299 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 SEPT11Q9NVA2 429 aaKnown RBP11.76□□□□□ -0.53
PKP4-215ENST00000494945 GREB1Q4ZG55 1949 aa11.76□□□□□ -0.53
PKP4-215ENST00000494945 ARHGEF37A1IGU5 675 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 CASTOR2A6NHX0 329 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 BTNL10A8MVZ5 291 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 TMEM189-UBE2V1I3L0A0 370 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 SPTLC1O15269 473 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 THAP12O43422 761 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 RTN2O75298 545 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 MMEP08473 750 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 FGFR1P11362 822 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 AARSP49588 968 aaKnown RBP eCLIP11.75□□□□□ -0.53
PKP4-215ENST00000494945 NDST1P52848 882 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 RNASELQ05823 741 aaKnown RBP11.75□□□□□ -0.53
PKP4-215ENST00000494945 CLEC16AQ2KHT3 1053 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 DCLRE1AQ6PJP8 1040 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 TMEM86AQ8N2M4 240 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 SLC4A11Q8NBS3 891 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 SPATA18Q8TC71 538 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 WHAMMQ8TF30 809 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 VWCEQ96DN2 955 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 C16orf45Q96MC5 204 aaPredicted RBP11.75□□□□□ -0.53
PKP4-215ENST00000494945 FAM193BQ96PV7 902 aaPredicted RBP11.75□□□□□ -0.53
PKP4-215ENST00000494945 PCDHB18PQ96TA0 734 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 NT5C1AQ9BXI3 368 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 ELOVL4Q9GZR5 314 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 ISCUQ9H1K1 167 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 PDCL3Q9H2J4 239 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 TBC1D13Q9NVG8 400 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 MYO1AQ9UBC5 1043 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 PCDHGC3Q9UN70 934 aa11.75□□□□□ -0.53
PKP4-215ENST00000494945 PLXNA4Q9HCM2 1894 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 A0A0U1RQJ8 604 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 ANKRD62A6NC57 917 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 RCCD1A6NED2 376 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 CYB561D2O14569 222 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 KIF5CO60282 957 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 BAIAP3O94812 1187 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 LSM8O95777 96 aaKnown RBP11.74□□□□□ -0.53
PKP4-215ENST00000494945 CYP1A1P04798 512 aaPredicted RBP11.74□□□□□ -0.53
PKP4-215ENST00000494945 TMEM253P0C7T8 217 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 VDRP11473 427 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 WARSP23381 471 aaKnown RBP11.74□□□□□ -0.53
PKP4-215ENST00000494945 ETF1P62495 437 aaKnown RBP11.74□□□□□ -0.53
PKP4-215ENST00000494945 STILQ15468 1287 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 ZNF394Q53GI3 561 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 DSTYKQ6XUX3 929 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 PALB2Q86YC2 1186 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 COLGALT2Q8IYK4 626 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 ADGRF2Q8IZF7 708 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 RNF10Q8N5U6 811 aaKnown RBP11.74□□□□□ -0.53
PKP4-215ENST00000494945 C3orf58Q8NDZ4 430 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 KBTBD7Q8WVZ9 684 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 ATRIPQ8WXE1 791 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 SENP8Q96LD8 212 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 CASD1Q96PB1 797 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 TWNKQ96RR1 684 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 MRPL45Q9BRJ2 306 aaKnown RBP11.74□□□□□ -0.53
PKP4-215ENST00000494945 ZNF518BQ9C0D4 1074 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 LACRTQ9GZZ8 138 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 SNX25Q9H3E2 840 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 IL23AQ9NPF7 189 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 RRAGDQ9NQL2 400 aaPredicted RBP11.74□□□□□ -0.53
PKP4-215ENST00000494945 PRKAG2Q9UGJ0 569 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 HMGXB4Q9UGU5 601 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 PUF60Q9UHX1 559 aaKnown RBP11.74□□□□□ -0.53
PKP4-215ENST00000494945 L1RE1Q9UN81 338 aa11.74□□□□□ -0.53
PKP4-215ENST00000494945 A0A0A6YYK5 440 aaPredicted RBP11.73□□□□□ -0.53
PKP4-215ENST00000494945 A8MXQ7 604 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 M0QZQ0 153 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 NCANO14594 1321 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 B3GAT3O94766 335 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 DDHD2O94830 711 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 CALCAP01258 141 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 FTLP02792 175 aaPredicted RBP11.73□□□□□ -0.53
PKP4-215ENST00000494945 AMHP03971 560 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 ODC1P11926 461 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 UNGP13051 313 aaPredicted RBP11.73□□□□□ -0.53
PKP4-215ENST00000494945 TNNT1P13805 278 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 CD19P15391 556 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 CSF2RAP15509 400 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 BRD2P25440 801 aaKnown RBP11.73□□□□□ -0.53
PKP4-215ENST00000494945 ITGB8P26012 769 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 CDH5P33151 784 aaPredicted RBP11.73□□□□□ -0.53
PKP4-215ENST00000494945 GNL1P36915 607 aaPredicted RBP11.73□□□□□ -0.53
PKP4-215ENST00000494945 LHX1P48742 406 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 GALCP54803 685 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 NOMO3P69849 1222 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 CENPCQ03188 943 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 PPIGQ13427 754 aaKnown RBP eCLIP11.73□□□□□ -0.53
PKP4-215ENST00000494945 CNGA2Q16280 664 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 SGO2Q562F6 1265 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 ACAD10Q6JQN1 1059 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.73□□□□□ -0.533e-6■■■■□ 26.5
PKP4-215ENST00000494945 ZNF280BQ86YH2 543 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 LRRC43Q8N309 656 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 PDCL2Q8N4E4 241 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 OR6B3Q8NGW1 331 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 CTNNBL1Q8WYA6 563 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms