RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 A0A1W2PQH9 124 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 USO1O60763 962 aaKnown RBP8.28□□□□□ -1.08
RPGR-210ENST00000494841 MAFO75444 373 aaPredicted RBP8.28□□□□□ -1.08
RPGR-210ENST00000494841 C22orf31O95567 290 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 GNAT1P11488 350 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 CASP1P29466 404 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 ETFBP38117 255 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 SYKP43405 635 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 CLCN3P51790 818 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 CLCN7P51798 805 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 SLC12A3P55017 1021 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 RNF4P78317 190 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 TMEM62Q0P6H9 643 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 SNX17Q15036 470 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 RINT1Q6NUQ1 792 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 CCDC73Q6ZRK6 1079 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 ANKRD33Q7Z3H0 272 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 KSR1Q8IVT5 923 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 GRAMD1CQ8IYS0 662 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 KIAA0319LQ8IZA0 1049 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 SYT2Q8N9I0 419 aaPredicted RBP8.28□□□□□ -1.08
RPGR-210ENST00000494841 DNAJB3Q8WWF6 145 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 MRPS27Q92552 414 aaKnown RBP8.28□□□□□ -1.08
RPGR-210ENST00000494841 DHX38Q92620 1227 aaKnown RBP8.28□□□□□ -1.08
RPGR-210ENST00000494841 RAD54LQ92698 747 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 DPF3Q92784 378 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 ZNF668Q96K58 619 aaPredicted RBP8.28□□□□□ -1.08
RPGR-210ENST00000494841 CCDC43Q96MW1 224 aaKnown RBP8.28□□□□□ -1.08
RPGR-210ENST00000494841 GBP4Q96PP9 640 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 PPP1R16BQ96T49 567 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 FAM49AQ9H0Q0 323 aaPredicted RBP8.28□□□□□ -1.08
RPGR-210ENST00000494841 GPRC5CQ9NQ84 441 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 PDLIM7Q9NR12 457 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 LMBRD1Q9NUN5 540 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 SUCOQ9UBS9 1254 aaKnown RBP8.28□□□□□ -1.08
RPGR-210ENST00000494841 TUBE1Q9UJT0 475 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 PCDHA2Q9Y5H9 948 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 ST14Q9Y5Y6 855 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 LOXHD1Q8IVV2 1947 aa8.28□□□□□ -1.08
RPGR-210ENST00000494841 COL1A2P08123 1366 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 TMEM265A0A087WTH1 108 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 FAM237AA0A1B0GTK4 181 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 MBLAC1A4D2B0 266 aaPredicted RBP8.27□□□□□ -1.09
RPGR-210ENST00000494841 TRIM43BA6NCK2 446 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 SMAD7O15105 426 aaKnown RBP8.27□□□□□ -1.09
RPGR-210ENST00000494841 MAGEB2O15479 319 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 SLC26A4O43511 780 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 ZNF202O95125 648 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 VTNP04004 478 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 CYP11B2P19099 503 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 POLGP54098 1239 aaPredicted RBP8.27□□□□□ -1.09
RPGR-210ENST00000494841 UBE2HP62256 183 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 SNW1Q13573 536 aaKnown RBP8.27□□□□□ -1.09
RPGR-210ENST00000494841 EMC2Q15006 297 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 FAM102BQ5T8I3 360 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 C1orf186Q6ZWK4 172 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 SERINC5Q86VE9 423 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 PPFIBP1Q86W92 1011 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 GPBP1Q86WP2 473 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 C7orf61Q8IZ16 206 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 IQUBQ8NA54 791 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 ENGASEQ8NFI3 743 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 PIWIL2Q8TC59 973 aaKnown RBP8.27□□□□□ -1.09
RPGR-210ENST00000494841 PRPF31Q8WWY3 499 aaKnown RBP8.27□□□□□ -1.09
RPGR-210ENST00000494841 LARP4BQ92615 738 aaKnown RBP8.27□□□□□ -1.09
RPGR-210ENST00000494841 TRIM43Q96BQ3 446 aaPredicted RBP8.27□□□□□ -1.09
RPGR-210ENST00000494841 DHRS1Q96LJ7 313 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 TOX2Q96NM4 488 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 DHX33Q9H6R0 707 aaKnown RBP8.27□□□□□ -1.09
RPGR-210ENST00000494841 XPNPEP1Q9NQW7 623 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 SUCLA2Q9P2R7 463 aaPredicted RBP8.27□□□□□ -1.09
RPGR-210ENST00000494841 PRKAG3Q9UGI9 489 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 UMODL1Q5DID0 1318 aa8.27□□□□□ -1.09
RPGR-210ENST00000494841 MYH11P35749 1972 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 IGKV6-21A0A0C4DH24 114 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 SMIM35A0A1B0GVV1 85 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 MYMKA6NI61 221 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 RSPH10B2B2RC85 870 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 HYAL3O43820 417 aaPredicted RBP8.26□□□□□ -1.09
RPGR-210ENST00000494841 CLTBP09497 229 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 RSPH10BP0C881 870 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 SRGAP2CP0DJJ0 459 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 CKBP12277 381 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 SYN1P17600 705 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 ITGB8P26012 769 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 CYP2C18P33260 490 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 THPOP40225 353 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 AFMP43652 599 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 PMS1P54277 932 aaKnown RBP8.26□□□□□ -1.09
RPGR-210ENST00000494841 CCL23P55773 120 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 TRIM71Q2Q1W2 868 aaKnown RBP8.26□□□□□ -1.09
RPGR-210ENST00000494841 ZNF618Q5T7W0 954 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 WFDC3Q8IUB2 231 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 LINC01465Q8N7H1 131 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 PAGE5Q96GU1 130 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 SEZ6LQ9BYH1 1024 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 BLZF1Q9H2G9 400 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 ATP6V0A4Q9HBG4 840 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 PCMTD2Q9NV79 361 aa8.26□□□□□ -1.09
RPGR-210ENST00000494841 AKT3Q9Y243 479 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms