RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 HNRNPH2P55795 449 aaKnown RBP11.04□□□□□ -0.64
SAMM50-206ENST00000494795 HUNKP57058 714 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 GPS2Q13227 327 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 FMNL3Q8IVF7 1028 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 CCDC50Q8IVM0 306 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 CCDC105Q8IYK2 499 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 SEC14L1Q92503 715 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 VTI1AQ96AJ9 217 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 C18orf25Q96B23 403 aaPredicted RBP11.04□□□□□ -0.64
SAMM50-206ENST00000494795 CPXM1Q96SM3 734 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 MPHOSPH6Q99547 160 aaKnown RBP11.04□□□□□ -0.64
SAMM50-206ENST00000494795 OSBPL7Q9BZF2 842 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 TCRBV5S1A1TA0A578 114 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 HSF2BPO75031 334 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 PHF2O75151 1096 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 COILP38432 576 aaPredicted RBP11.04□□□□□ -0.64
SAMM50-206ENST00000494795 HSPA9P38646 679 aaKnown RBP11.04□□□□□ -0.64
SAMM50-206ENST00000494795 RAD23BP54727 409 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 CCNA1P78396 465 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 CAP1Q01518 475 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 GRM1Q13255 1194 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 NNTQ13423 1086 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 DUSP28Q4G0W2 176 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 SEL1L2Q5TEA6 688 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 IMPG2Q9BZV3 1241 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 SLITRK6Q9H5Y7 841 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 SNTG2Q9NY99 539 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 KLK14Q9P0G3 267 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 MORF4L1Q9UBU8 362 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 UTP11Q9Y3A2 253 aaKnown RBP11.04□□□□□ -0.64
SAMM50-206ENST00000494795 SMIM23A6NLE4 172 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 MIF4GDA9UHW6 222 aaKnown RBP11.03□□□□□ -0.64
SAMM50-206ENST00000494795 B4GALT4O60513 344 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 ETS1P14921 441 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 NRLP54845 237 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 ZNF844Q08AG5 666 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 PLEKHA7Q6IQ23 1121 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 PLEKHH3Q7Z736 793 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 RNF39Q9H2S5 420 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 SEMA4AQ9H3S1 761 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 GOLGA2P5Q9HBQ8 144 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 VTA1Q9NP79 307 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 AGAP1Q9UPQ3 857 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 KAT6AQ92794 2004 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 SCN4AP35499 1836 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
SAMM50-206ENST00000494795 CCDC66A2RUB6 948 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 MYADML2A6NDP7 307 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 PPFIA4O75335 1185 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 GRAP2O75791 330 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 PROSCO94903 275 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 ZSCAN5DPP0CG00 497 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 RFC1P35251 1148 aaPredicted RBP11.03□□□□□ -0.64
SAMM50-206ENST00000494795 TFDP1Q14186 410 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 ANKRD23Q86SG2 305 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 SLC4A11Q8NBS3 891 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 CCDC26Q8TAB7 109 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 LRRN4Q8WUT4 740 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 RAPGEF5Q92565 580 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 EXOC4Q96A65 974 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 C2orf40Q9H1Z8 148 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 NXF3Q9H4D5 531 aaKnown RBP11.03□□□□□ -0.64
SAMM50-206ENST00000494795 TUBGCP4Q9UGJ1 667 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 TREHO43280 583 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 NPTXRO95502 500 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 ERBB2P04626 1255 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 TBXAS1P24557 533 aaPredicted RBP11.03□□□□□ -0.64
SAMM50-206ENST00000494795 HPDP32754 393 aaPredicted RBP11.03□□□□□ -0.64
SAMM50-206ENST00000494795 CHKAP35790 457 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 TNFAIP2Q03169 654 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 PDCLQ13371 301 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 MTM1Q13496 603 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 ZNF618Q5T7W0 954 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 LRRC31Q6UY01 552 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 PHF13Q86YI8 300 aaPredicted RBP11.03□□□□□ -0.64
SAMM50-206ENST00000494795 TAB3Q8N5C8 712 aaPredicted RBP11.03□□□□□ -0.64
SAMM50-206ENST00000494795 DNAJB3Q8WWF6 145 aa11.03□□□□□ -0.64
SAMM50-206ENST00000494795 BCCIPQ9P287 314 aaKnown RBP eCLIP11.03□□□□□ -0.64
SAMM50-206ENST00000494795 CD48P09326 243 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 IL1R2P27930 398 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 PHKA2P46019 1235 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 SLC26A2P50443 739 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 GUCY1A3Q02108 690 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 ZNF484Q5JVG2 852 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 C2orf69Q8N8R5 385 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 ANKRD36BP1Q96IX9 119 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 ARHGAP39Q9C0H5 1083 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 SLC5A4Q9NY91 659 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 KCNG1Q9UIX4 513 aa11.02□□□□□ -0.64
SAMM50-206ENST00000494795 TMEM191CA6NGB0 347 aa11.02□□□□□ -0.65
SAMM50-206ENST00000494795 MEIS3P2A8K0S8 358 aa11.02□□□□□ -0.65
SAMM50-206ENST00000494795 TNNC2P02585 160 aa11.02□□□□□ -0.65
SAMM50-206ENST00000494795 LACTBP83111 547 aaPredicted RBP11.02□□□□□ -0.65
SAMM50-206ENST00000494795 SGO2Q562F6 1265 aa11.02□□□□□ -0.65
SAMM50-206ENST00000494795 TRNP1Q6NT89 227 aa11.02□□□□□ -0.65
SAMM50-206ENST00000494795 MFSD7Q6UXD7 560 aa11.02□□□□□ -0.65
SAMM50-206ENST00000494795 CCDC25Q86WR0 208 aa11.02□□□□□ -0.65
SAMM50-206ENST00000494795 FEZF2Q8TBJ5 459 aa11.02□□□□□ -0.65
SAMM50-206ENST00000494795 FMO2Q99518 471 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms