RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 FBXL18Q96ME1 805 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 ZDHHC15Q96MV8 337 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 DDX39AO00148 427 aaKnown RBP16.2■□□□□ 0.18
SDF4-207ENST00000494748 GCNT1Q02742 428 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 AP1B1Q10567 949 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 OASLQ15646 514 aaKnown RBP16.2■□□□□ 0.18
SDF4-207ENST00000494748 EAPPQ56P03 285 aaPredicted RBP16.2■□□□□ 0.18
SDF4-207ENST00000494748 CEP128Q6ZU80 1094 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 BANPQ8N9N5 519 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 AZIN2Q96A70 460 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 FBXO6Q9NRD1 293 aaPredicted RBP16.2■□□□□ 0.18
SDF4-207ENST00000494748 TAS2R1Q9NYW7 299 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 STX18Q9P2W9 335 aaKnown RBP16.2■□□□□ 0.18
SDF4-207ENST00000494748 CAPN9O14815 690 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 PIAS1O75925 651 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 PIK3CAP42336 1068 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 ARSEP51690 589 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 NOP14P78316 857 aaKnown RBP16.2■□□□□ 0.18
SDF4-207ENST00000494748 MORF4L2Q15014 288 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 ZBED8Q8IZ13 594 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.2■□□□□ 0.182e-6■■■■■ 27.4
SDF4-207ENST00000494748 TRAPPC9Q96Q05 1148 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 LBHD1Q9BQE6 289 aaPredicted RBP16.2■□□□□ 0.18
SDF4-207ENST00000494748 TIPINQ9BVW5 301 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 HEY2Q9UBP5 337 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 FARP1Q9Y4F1 1045 aaPredicted RBP16.2■□□□□ 0.18
SDF4-207ENST00000494748 TJP3O95049 919 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 POLR2MP0CAP2 368 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 KRT5P13647 590 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 ABCB5Q2M3G0 1257 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 MSS51Q4VC12 460 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 C15orf39Q6ZRI6 1047 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 GSTA5Q7RTV2 222 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 TCP10LQ8TDR4 215 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 MRRFQ96E11 262 aaKnown RBP16.2■□□□□ 0.18
SDF4-207ENST00000494748 SLITRK1Q96PX8 696 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 RIT2Q99578 217 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 IDI2Q9BXS1 227 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 VPS37BQ9H9H4 285 aa16.2■□□□□ 0.18
SDF4-207ENST00000494748 DENND3A2RUS2 1198 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 DHRS4L1P0CG22 281 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 NFX1Q12986 1120 aaKnown RBP16.19■□□□□ 0.18
SDF4-207ENST00000494748 GPS1Q13098 491 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 ADGRD1Q6QNK2 874 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 TMC2Q8TDI7 906 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 IWS1Q96ST2 819 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 DDX43Q9NXZ2 648 aaKnown RBP16.19■□□□□ 0.18
SDF4-207ENST00000494748 FETUBQ9UGM5 382 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 WASF2Q9Y6W5 498 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 DLDP09622 509 aaKnown RBP16.19■□□□□ 0.18
SDF4-207ENST00000494748 GLRA2P23416 452 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 ZNF252P-AS1Q0IIN9 211 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 DOK7Q18PE1 504 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 PLEKHA7Q6IQ23 1121 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 ZNF516Q92618 1163 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 NSL1Q96IY1 281 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 A0A1B0GVG6 124 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 WDR91A4D1P6 747 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 CFAP69A5D8W1 941 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 HAUS5O94927 633 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 SERPINB3P29508 390 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 PEX3P56589 373 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 GEMIN4P57678 1058 aaKnown RBP16.19■□□□□ 0.18
SDF4-207ENST00000494748 UGCGQ16739 394 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 TTC7BQ86TV6 843 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 LRRC6Q86X45 466 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 TMEM161BQ8NDZ6 487 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 DCAKDQ8WVC6 231 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 MXRA8Q9BRK3 442 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 PPCSQ9HAB8 311 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 PCMTD2Q9NV79 361 aa16.19■□□□□ 0.18
SDF4-207ENST00000494748 LTBP4Q8N2S1 1624 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 KLRG2A4D1S0 409 aaPredicted RBP16.18■□□□□ 0.18
SDF4-207ENST00000494748 PI4K2BG5E9Z4 385 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 ETV4P43268 484 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 CYP24A1Q07973 514 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 DLGAP5Q15398 846 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 FYB2Q5VWT5 728 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 KIFC3Q9BVG8 833 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 MMADHCQ9H3L0 296 aaPredicted RBP16.18■□□□□ 0.18
SDF4-207ENST00000494748 SYNCQ9H7C4 482 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 TBX20Q9UMR3 447 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 C2orf71A6NGG8 1288 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 GH2P01242 217 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 SERPINB2P05120 415 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 P4HBP07237 508 aaKnown RBP16.18■□□□□ 0.18
SDF4-207ENST00000494748 RARBP10826 455 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 AMPD1P23109 780 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 ECE1P42892 770 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 CACNA2D1P54289 1103 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 NOMO3P69849 1222 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 TFDP1Q14186 410 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 KRT72Q14CN4 511 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 HSF5Q4G112 596 aaPredicted RBP16.18■□□□□ 0.18
SDF4-207ENST00000494748 SH2D5Q6ZV89 423 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 ANKMY2Q8IV38 441 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 MAP4K3Q8IVH8 894 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 SP8Q8IXZ3 490 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 TRIM11Q96F44 468 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 VPS11Q9H270 941 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms