RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ZRSR2Q15696 482 aaKnown RBP2.75□□□□□ -1.97
PTPN12-212ENST00000494248 ATP2B3Q16720 1220 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.75□□□□□ -1.97
PTPN12-212ENST00000494248 FAM153CQ494X1 144 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 MAP9Q49MG5 647 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 ACRBPQ8NEB7 543 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 TSPEARQ8WU66 669 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 LEO1Q8WVC0 666 aaPredicted RBP2.75□□□□□ -1.97
PTPN12-212ENST00000494248 LPIN2Q92539 896 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 USP7Q93009 1102 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 CYFIP2Q96F07 1278 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 MARS2Q96GW9 593 aaKnown RBP2.75□□□□□ -1.97
PTPN12-212ENST00000494248 FBXL20Q96IG2 436 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 GREM2Q9H772 168 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 KANSL2Q9H9L4 492 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 RBM12Q9NTZ6 932 aaKnown RBP2.75□□□□□ -1.97
PTPN12-212ENST00000494248 INTS13Q9NVM9 706 aa2.75□□□□□ -1.97
PTPN12-212ENST00000494248 CLSPNQ9HAW4 1339 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 PRAMEF33A0A0G2JMD5 474 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 GOLGA8AA7E2F4 631 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 TISP43B9A030 160 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 IFRD1O00458 451 aaPredicted RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 PPP6CO00743 305 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 EPB41L2O43491 1005 aaKnown RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 PRAMEF10O60809 474 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 CAND2O75155 1236 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 ULK1O75385 1050 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 ZRANB2O95218 330 aaKnown RBP eCLIP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 LDHAP00338 332 aaKnown RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 FGAP02671 866 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 ENPP1P22413 925 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 SESN3P58005 492 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 NOMO3P69849 1222 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 MRPS9P82933 396 aaKnown RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 POU5F1Q01860 360 aaKnown RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 CREMQ03060 361 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 FPGSQ05932 587 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 LMOD3Q0VAK6 560 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 PDCD1Q15116 288 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 NOMO1Q15155 1222 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 MAPRE1Q15691 268 aaKnown RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 ADRM1Q16186 407 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 TXNRD1Q16881 649 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 NOMO2Q5JPE7 1267 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 DDX46Q7L014 1031 aaKnown RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 IRF2BP2Q7Z5L9 587 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 SAMD3Q8N6K7 520 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 NLGN4YQ8NFZ3 816 aaPredicted RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 SLC30A5Q8TAD4 765 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 AUTS2Q8WXX7 1259 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 PGBD1Q96JS3 809 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 RNPC3Q96LT9 517 aaKnown RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 HAPLN3Q96S86 360 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 ADI1Q9BV57 179 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 TARS2Q9BW92 718 aaKnown RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 GSTO2Q9H4Y5 243 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 MAP3K20Q9NYL2 800 aaKnown RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 VSX1Q9NZR4 365 aaPredicted RBP2.74□□□□□ -1.97
PTPN12-212ENST00000494248 ANAPC4Q9UJX5 808 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 PADI4Q9UM07 663 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 EDARQ9UNE0 448 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 PROCRQ9UNN8 238 aa2.74□□□□□ -1.97
PTPN12-212ENST00000494248 GTPBP1O00178 669 aaKnown RBP2.73□□□□□ -1.97
PTPN12-212ENST00000494248 ZEB2O60315 1214 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 ENDOD1O94919 500 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 GAS8-AS1O95177 125 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 CYP2D6P10635 497 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 FCER1AP12319 257 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 FPR1P21462 350 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 GATA3P23771 443 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 CERS1P27544 350 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 GNALP38405 381 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 CCT2P78371 535 aaKnown RBP2.73□□□□□ -1.97
PTPN12-212ENST00000494248 PPP3CAQ08209 521 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 FAPQ12884 760 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 HLTFQ14527 1009 aaKnown RBP eCLIP2.73□□□□□ -1.97
PTPN12-212ENST00000494248 PROSER3Q2NL68 480 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 ANO4Q32M45 955 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 DACT2Q5SW24 774 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 EFCAB2Q5VUJ9 269 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 ICE2Q659A1 982 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 SUMO4Q6EEV6 95 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 UBE3BQ7Z3V4 1068 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.73□□□□□ -1.97
PTPN12-212ENST00000494248 PPM1EQ8WY54 764 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 PAGR1Q9BTK6 254 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 ACE2Q9BYF1 805 aaPredicted RBP2.73□□□□□ -1.97
PTPN12-212ENST00000494248 ZNF700Q9H0M5 742 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 TMX4Q9H1E5 349 aaPredicted RBP2.73□□□□□ -1.97
PTPN12-212ENST00000494248 IFT122Q9HBG6 1241 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 TOPORSQ9NS56 1045 aaPredicted RBP2.73□□□□□ -1.97
PTPN12-212ENST00000494248 NRBP1Q9UHY1 535 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 AJAP1Q9UKB5 411 aaPredicted RBP2.73□□□□□ -1.97
PTPN12-212ENST00000494248 PLAAQ9Y263 795 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 NEU2Q9Y3R4 380 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 AFG3L2Q9Y4W6 797 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 EID1Q9Y6B2 187 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 NOTCH3Q9UM47 2321 aa2.73□□□□□ -1.97
PTPN12-212ENST00000494248 CDHR4A6H8M9 788 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 TARM1B6A8C7 271 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms