RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 TMEM132CQ8N3T6 1108 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 SLC16A11Q8NCK7 471 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 B3GALNT2Q8NCR0 500 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 CAGE1Q8TC20 777 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 TTC17Q96AE7 1141 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 PTCD3Q96EY7 689 aaKnown RBP2.95□□□□□ -1.94
LMNB1-207ENST00000494185 SLC39A13Q96H72 371 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 SORCS2Q96PQ0 1159 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 LRFN3Q9BTN0 628 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 ALG8Q9BVK2 526 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 C1orf43Q9BWL3 253 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 B3GNT5Q9BYG0 378 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 TMEM60Q9H2L4 133 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 MRPL46Q9H2W6 279 aaKnown RBP2.95□□□□□ -1.94
LMNB1-207ENST00000494185 SERHL2Q9H4I8 314 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 SLAMF7Q9NQ25 335 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.95□□□□□ -1.94
LMNB1-207ENST00000494185 TMEM74BQ9NUR3 256 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 PACSIN3Q9UKS6 424 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 SHOC2Q9UQ13 582 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 PLEKHM1Q9Y4G2 1056 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 PCDHA1Q9Y5I3 950 aa2.95□□□□□ -1.94
LMNB1-207ENST00000494185 PIPSLA2A3N6 862 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 KRTAP9-7A8MTY7 169 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 GRXCR1A8MXD5 290 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 AHRRA9YTQ3 701 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 GCOM1H8Y6P7 765 aaPredicted RBP2.94□□□□□ -1.94
LMNB1-207ENST00000494185 ZNF185O15231 689 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 PHGDHO43175 533 aaKnown RBP2.94□□□□□ -1.94
LMNB1-207ENST00000494185 INMTO95050 263 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 GCP02774 474 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 THP07101 528 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 ATXN1LP0C7T5 689 aaKnown RBP2.94□□□□□ -1.94
LMNB1-207ENST00000494185 RPL17P18621 184 aaKnown RBP2.94□□□□□ -1.94
LMNB1-207ENST00000494185 ZNF135P52742 658 aaPredicted RBP2.94□□□□□ -1.94
LMNB1-207ENST00000494185 NXPH1P58417 271 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 PSMC1P62191 440 aaKnown RBP2.94□□□□□ -1.94
LMNB1-207ENST00000494185 NOMO3P69849 1222 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 MRPS35P82673 323 aaKnown RBP2.94□□□□□ -1.94
LMNB1-207ENST00000494185 OCA2Q04671 838 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 RAB32Q13637 225 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 KIF22Q14807 665 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 LLGL1Q15334 1064 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 FAM153CQ494X1 144 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 NOMO2Q5JPE7 1267 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 KHDC1LQ5JSQ8 128 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 EMC10Q5UCC4 262 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 METRNLQ641Q3 311 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 TAPT1Q6NXT6 567 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 ZNF783Q6ZMS7 281 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 CCDC149Q6ZUS6 474 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 RHOUQ7L0Q8 258 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 CHST15Q7LFX5 561 aaPredicted RBP2.94□□□□□ -1.94
LMNB1-207ENST00000494185 MRGPREQ86SM8 312 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 PPP1R3BQ86XI6 285 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 ZFPM1Q8IX07 1006 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 SLC17A8Q8NDX2 589 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 PLBD2Q8NHP8 589 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 PGBD1Q96JS3 809 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 TRIB1Q96RU8 372 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 NEU1Q99519 415 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 MRIQ9BWK5 157 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 PCED1AQ9H1Q7 454 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 GPR35Q9HC97 309 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 STAP2Q9UGK3 403 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 DDX20Q9UHI6 824 aaKnown RBP2.94□□□□□ -1.94
LMNB1-207ENST00000494185 CPA4Q9UI42 421 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 PCDHA6Q9UN73 950 aa2.94□□□□□ -1.94
LMNB1-207ENST00000494185 SPATA31A3Q5VYP0 1347 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 A0A0B4J269 797 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 CFAP69A5D8W1 941 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 MARCH11A6NNE9 402 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 A6NNZ2 444 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 FOXN3O00409 490 aaPredicted RBP2.93□□□□□ -1.94
LMNB1-207ENST00000494185 TPP1O14773 563 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 PLSCR1O15162 318 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 PRSS23O95084 383 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 MATN4O95460 622 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 ZBED1O96006 694 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 AHSGP02765 367 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 HRGP04196 525 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 FCER1AP12319 257 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 PHKA1P46020 1223 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 NPTX2P47972 431 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 SOX10P56693 466 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 SOX8P57073 446 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 INHBEP58166 350 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 LOXL3P58215 753 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 FAM193AP78312 1265 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 SLC25A3Q00325 362 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 EXOSC9Q06265 439 aaKnown RBP2.93□□□□□ -1.94
LMNB1-207ENST00000494185 SLFN5Q08AF3 891 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 OS9Q13438 667 aaPredicted RBP2.93□□□□□ -1.94
LMNB1-207ENST00000494185 TUBB3Q13509 450 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 CNN3Q15417 329 aaKnown RBP2.93□□□□□ -1.94
LMNB1-207ENST00000494185 KIAA0753Q2KHM9 967 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 TMEM63BQ5T3F8 832 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 HECTD2Q5U5R9 776 aa2.93□□□□□ -1.94
LMNB1-207ENST00000494185 FAM160B1Q5W0V3 765 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms