RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 GCKP35557 465 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 DSG1Q02413 1049 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 TCIRG1Q13488 830 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 MEA1Q16626 185 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZBTB41Q5SVQ8 909 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 CTR9Q6PD62 1173 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 C11orf57Q6ZUT1 292 aaPredicted RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 GAREM2Q75VX8 874 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 CXXC5Q7LFL8 322 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 LRRTM3Q86VH5 581 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 RAVER1Q8IY67 606 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 KRT222Q8N1A0 295 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 CALML6Q8TD86 181 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 CHTF18Q8WVB6 975 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 GTF3C6Q969F1 213 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 SORCS2Q96PQ0 1159 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 TARS2Q9BW92 718 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 TOMM22Q9NS69 142 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 THG1LQ9NWX6 298 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 TERF2IPQ9NYB0 399 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 TPCN1Q9ULQ1 816 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 COL4A3BPQ9Y5P4 624 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 NFS1Q9Y697 457 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 SPATA31A5Q5VU36 1347 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 SPATA31A6Q5VVP1 1343 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 SPATA31A7Q8IWB4 1347 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 ARHGEF17Q96PE2 2063 aaPredicted RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 A0A0A6YYK5 440 aaPredicted RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 ENPP3O14638 875 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 PFKFB2O60825 505 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 HSD3B2P26439 372 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 ADCY7P51828 1080 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 HNRNPH2P55795 449 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 BPIFB4P59827 614 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 EIF4A2Q14240 407 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 DHX8Q14562 1220 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 ME3Q16798 604 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 SLC5A9Q2M3M2 681 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 FNDC3BQ53EP0 1204 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 DAB2IPQ5VWQ8 1189 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 MAMDC4Q6UXC1 1216 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 LRRC31Q6UY01 552 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 MB21D1Q8N884 522 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZNF503Q96F45 646 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 SCYL1Q96KG9 808 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 NEUROD6Q96NK8 337 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 NCAPGQ9BPX3 1015 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 SOX7Q9BT81 388 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 UPF2Q9HAU5 1272 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 CABP5Q9NP86 173 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 EDARQ9UNE0 448 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 TESMINQ9Y4I5 508 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 CDHR2Q9BYE9 1310 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 PNMA6EA0A0J9YXQ4 647 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 TRIM64BA6NI03 449 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 H7C1D1 291 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 ELL2O00472 640 aaPredicted RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 IPO8O15397 1037 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 MGRN1O60291 552 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 EIF3JO75822 258 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 FAM155BO75949 473 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 MAGEA9P43362 315 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 AK2P54819 239 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 CUL4BQ13620 913 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 FAM214AQ32MH5 1076 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 SPDYCQ5MJ68 293 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 FNDC7Q5VTL7 733 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 RASGRP2Q7LDG7 609 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 ADGRE4PQ86SQ3 457 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 LEO1Q8WVC0 666 aaPredicted RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 EDAQ92838 391 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 SMARCE1Q969G3 411 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 CAVIN3Q969G5 261 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 DYDC2Q96IM9 177 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 TEX13AQ9BXU3 409 aaPredicted RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 CSRNP2Q9H175 543 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 EBF2Q9HAK2 575 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 B4GALT6Q9UBX8 382 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 REXO2Q9Y3B8 237 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZNF335Q9H4Z2 1342 aaPredicted RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 ROBO3Q96MS0 1386 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 OTOFQ9HC10 1997 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 CCDC163A0A0D9SF12 145 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 SIGLEC16A6NMB1 481 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 KIF2AO00139 706 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 TGM5O43548 720 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 NARSO43776 548 aaKnown RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 FZD7O75084 574 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 PCDH8O95206 1070 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 CCT4P50991 539 aaKnown RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 NEK4P51957 841 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 ROM1Q03395 351 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 PAPD7Q5XG87 772 aaKnown RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 POLNQ7Z5Q5 900 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 ARHGEF25Q86VW2 580 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 VSTM4Q8IW00 320 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 D2HGDHQ8N465 521 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 AFAP1Q8N556 730 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 TC2NQ8N9U0 490 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 MAML3Q96JK9 1138 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms