RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 FBXL5Q9UKA1 691 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 CLASP2O75122 1294 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 WEE2P0C1S8 567 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 SPATA31D3P0C874 917 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 KLRC2P26717 231 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 OR1D2P34982 312 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 ASPAP45381 313 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 APBA1Q02410 837 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 ZNF280DQ6N043 979 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 LLGL2Q6P1M3 1020 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 SPATA31D4Q6ZUB0 917 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 OR10T2Q8NGX3 314 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 LMO3Q8TAP4 145 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 ARID3AQ99856 593 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 DSEQ9UL01 958 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 SSX2IPQ9Y2D8 614 aa19.16■□□□□ 0.66
PDLIM7-208ENST00000493815 H7C4K7 107 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 PMM2O15305 246 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 LINC01565O15544 149 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 TBC1D4O60343 1298 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 CAVIN2O95810 425 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 ACAT1P24752 427 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 LMO2P25791 158 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 CETN1Q12798 172 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 WDR44Q5JSH3 913 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 LIMS2Q7Z4I7 341 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 CCDC150Q8NCX0 1101 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 TAF4BQ92750 862 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 INTS2Q9H0H0 1204 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 DDX43Q9NXZ2 648 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 GCNT4Q9P109 453 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 FNIP2Q9P278 1114 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 LIMA1Q9UHB6 759 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 NME7Q9Y5B8 376 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 BACE2Q9Y5Z0 518 aa19.15■□□□□ 0.66
PDLIM7-208ENST00000493815 ARHGEF37A1IGU5 675 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 P4HA2O15460 535 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 PDGFRBP09619 1106 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 SLC9A1P19634 815 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 NDUFV1P49821 464 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 COPB1P53618 953 aaKnown RBP19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 DUSP6Q16828 381 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 CCDC142Q17RM4 750 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 PDXDC1Q6P996 788 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 APTXQ7Z2E3 356 aaKnown RBP19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 EHBP1Q8NDI1 1231 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 VN1R2Q8NFZ6 395 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 NIF3L1Q9GZT8 377 aa19.14■□□□□ 0.66
PDLIM7-208ENST00000493815 GOLGA6L19H0YKK7 550 aa19.14■□□□□ 0.65
PDLIM7-208ENST00000493815 ADH1AP07327 375 aa19.14■□□□□ 0.65
PDLIM7-208ENST00000493815 EPCAMP16422 314 aa19.14■□□□□ 0.65
PDLIM7-208ENST00000493815 EP400NLQ6ZTU2 488 aa19.14■□□□□ 0.65
PDLIM7-208ENST00000493815 DPH6Q7L8W6 267 aa19.14■□□□□ 0.65
PDLIM7-208ENST00000493815 GPR65Q8IYL9 337 aa19.14■□□□□ 0.65
PDLIM7-208ENST00000493815 TMEM86AQ8N2M4 240 aa19.14■□□□□ 0.65
PDLIM7-208ENST00000493815 ANKRD20A12PQ8NF67 263 aa19.14■□□□□ 0.65
PDLIM7-208ENST00000493815 OR6B3Q8NGW1 331 aa19.14■□□□□ 0.65
PDLIM7-208ENST00000493815 PPP2R3CQ969Q6 453 aa19.14■□□□□ 0.65
PDLIM7-208ENST00000493815 TSC2P49815 1807 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 GABRDO14764 452 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 P4HA1P13674 534 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 CD58P19256 250 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 GNL1P36915 607 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 CLCN4P51793 760 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 ROR1Q01973 937 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 ORC1Q13415 861 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 SKIV2LQ15477 1246 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 EXOC3L4Q17RC7 722 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 SLC8B1Q6J4K2 584 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 GBP6Q6ZN66 633 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 RRAGAQ7L523 313 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 ARHGEF19Q8IW93 802 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 THEM5Q8N1Q8 247 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 KAT5Q92993 513 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 PGLYRP2Q96PD5 576 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 LPIN3Q9BQK8 851 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 BCO2Q9BYV7 579 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 SNX25Q9H3E2 840 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 HCFC2Q9Y5Z7 792 aa19.13■□□□□ 0.65
PDLIM7-208ENST00000493815 WDR27A2RRH5 827 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 TGM5O43548 720 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 ATP2C2O75185 946 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 TACC1O75410 805 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 CPB1P15086 417 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 WARSP23381 471 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 PON1P27169 355 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 PSMC1P62191 440 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 CREMQ03060 361 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 PTPN21Q16825 1174 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 GJB7Q6PEY0 223 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 TRIM65Q6PJ69 517 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 LRRTM3Q86VH5 581 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 PPM1KQ8N3J5 372 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 NT5C1BQ96P26 610 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 DPEP3Q9H4B8 488 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 HMGXB4Q9UGU5 601 aa19.12■□□□□ 0.65
PDLIM7-208ENST00000493815 LRRC10BA6NIK2 292 aa19.11■□□□□ 0.65
PDLIM7-208ENST00000493815 OR6C75A6NL08 312 aa19.11■□□□□ 0.65
PDLIM7-208ENST00000493815 GLP2RO95838 553 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms