RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 HADHQ16836 314 aaKnown RBP10.21□□□□□ -0.78
NPHP3-209ENST00000493732 LY6KQ17RY6 165 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 EAPPQ56P03 285 aaPredicted RBP10.21□□□□□ -0.78
NPHP3-209ENST00000493732 ZNF484Q5JVG2 852 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 RNF187Q5TA31 235 aaPredicted RBP10.21□□□□□ -0.78
NPHP3-209ENST00000493732 PCGF5Q86SE9 256 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 ZCCHC9Q8N567 271 aaKnown RBP10.21□□□□□ -0.78
NPHP3-209ENST00000493732 SHCBP1Q8NEM2 672 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 ELMO3Q96BJ8 720 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 SEC16BQ96JE7 1060 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 CFAP57Q96MR6 1250 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 SPATA33Q96N06 139 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 PLCD4Q9BRC7 762 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 MTMR12Q9C0I1 747 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 RPF1Q9H9Y2 349 aaKnown RBP10.21□□□□□ -0.78
NPHP3-209ENST00000493732 PTPRHQ9HD43 1115 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 SAMD15Q9P1V8 674 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 DDX20Q9UHI6 824 aaKnown RBP10.21□□□□□ -0.78
NPHP3-209ENST00000493732 KCNH4Q9UQ05 1017 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 DNAJC25-GNG10A0A024R161 153 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 TCRBV5S1A1TA0A578 114 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 SPDYE5A6NIY4 337 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 ABLIM1O14639 778 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 MAGEB2O15479 319 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 LIASO43766 372 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 CALCAP01258 141 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 KRT1P04264 644 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 WEE2P0C1S8 567 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 DRD4P21917 467 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 LIG3P49916 1009 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 GSCP56915 257 aaPredicted RBP10.2□□□□□ -0.78
NPHP3-209ENST00000493732 TFAMQ00059 246 aaKnown RBP10.2□□□□□ -0.78
NPHP3-209ENST00000493732 IFT88Q13099 833 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 PPIL2Q13356 520 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 ITIH4Q14624 930 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 FAM187BQ17R55 369 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 TFDP3Q5H9I0 405 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 ZNF667Q5HYK9 610 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 IZUMO3Q5VZ72 239 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 GPAT2Q6NUI2 795 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 CCDC197Q8NCU1 140 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 EPS8L3Q8TE67 593 aaKnown RBP10.2□□□□□ -0.78
NPHP3-209ENST00000493732 ATG4AQ8WYN0 398 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 FAM212AQ96EL1 285 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 SLITRK1Q96PX8 696 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 MMP19Q99542 508 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 HEMGNQ9BXL5 484 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 PHACTR1Q9C0D0 580 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 CYP3A43Q9HB55 503 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 ERAP1Q9NZ08 941 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 LGALS13Q9UHV8 139 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 PTPRFP10586 1907 aa10.2□□□□□ -0.78
NPHP3-209ENST00000493732 SMIM23A6NLE4 172 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 SIGLEC16A6NMB1 481 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 INO80B-WBP1J3KQ70 363 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 TP73O15350 636 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 ACSL3O95573 720 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 EDN1P05305 212 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 ITGAVP06756 1048 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 HOXC6P09630 235 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 MCF2P10911 925 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 GHRP10912 638 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 CD58P19256 250 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 KLRC2P26717 231 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 TNFSF9P41273 254 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 IFI35P80217 286 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 MKRN3Q13064 507 aaKnown RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 MORF4L2Q15014 288 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 PPP1R15BQ5SWA1 713 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 HIBCHQ6NVY1 386 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 CCDC62Q6P9F0 684 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 SPOCD1Q6ZMY3 1216 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 PHLDB2Q86SQ0 1253 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 RHPN2Q8IUC4 686 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 ATXN2LQ8WWM7 1075 aaKnown RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 ARHGEF2Q92974 986 aaKnown RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 NKD2Q969F2 451 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 MCEEQ96PE7 176 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 ZNF317Q96PQ6 595 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 INO80BQ9C086 356 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 ASB7Q9H672 318 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 EFCC1Q9HA90 598 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 AAASQ9NRG9 546 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 ZNF148Q9UQR1 794 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 DICER1Q9UPY3 1922 aaKnown RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 DNALI1O14645 258 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 CNMDO75829 334 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 CFHP08603 1231 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 TXNP10599 105 aaKnown RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 ASPAP45381 313 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 RPL7AP62424 266 aaKnown RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 ACTN3Q08043 901 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 LAMC2Q13753 1193 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 ZNF268Q14587 947 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 KYNUQ16719 465 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 HSDL1Q3SXM5 330 aa10.19□□□□□ -0.78
NPHP3-209ENST00000493732 LACTB2Q53H82 288 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-209ENST00000493732 EFCAB12Q6NXP0 572 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms