RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 PCDHB8Q9UN66 801 aa12.47□□□□□ -0.41
CTSA-209ENST00000493522 ARHGEF37A1IGU5 675 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 PROB1E7EW31 1015 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 SPTLC1O15269 473 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 ADH1AP07327 375 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 RPL17P18621 184 aaKnown RBP12.46□□□□□ -0.41
CTSA-209ENST00000493522 PAX3P23760 479 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 PIK3CAP42336 1068 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 AARSP49588 968 aaKnown RBP eCLIP12.46□□□□□ -0.41
CTSA-209ENST00000493522 MYO1EQ12965 1108 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 ATAT1Q5SQI0 421 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
CTSA-209ENST00000493522 RARS2Q5T160 578 aaKnown RBP12.46□□□□□ -0.41
CTSA-209ENST00000493522 KIAA0319Q5VV43 1072 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 TDRD10Q5VZ19 366 aaKnown RBP12.46□□□□□ -0.41
CTSA-209ENST00000493522 ZNF280DQ6N043 979 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 ZDHHC14Q8IZN3 488 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 LRRC52Q8N7C0 313 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 APPL2Q8NEU8 664 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 ZNF516Q92618 1163 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 SENP8Q96LD8 212 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 KLHL5Q96PQ7 755 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.46□□□□□ -0.41
CTSA-209ENST00000493522 ANO10Q9NW15 660 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 ARMCX3Q9UH62 379 aaPredicted RBP12.46□□□□□ -0.41
CTSA-209ENST00000493522 USTQ9Y2C2 406 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 IRAK3Q9Y616 596 aa12.46□□□□□ -0.41
CTSA-209ENST00000493522 DENND4AQ7Z401 1863 aa12.46□□□□□ -0.42
CTSA-209ENST00000493522 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
CTSA-209ENST00000493522 KPNA7A9QM74 516 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 M0QZQ0 153 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 TEX28O15482 410 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 FGFR1OPO95684 399 aaKnown RBP12.45□□□□□ -0.42
CTSA-209ENST00000493522 CNPP09543 421 aaKnown RBP12.45□□□□□ -0.42
CTSA-209ENST00000493522 KLRC2P26717 231 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 GCLMP48507 274 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 MXI1P50539 228 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 CLDN10P78369 228 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 ENPEPQ07075 957 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 SKOR2Q2VWA4 1001 aaPredicted RBP12.45□□□□□ -0.42
CTSA-209ENST00000493522 C1orf220Q5T0J3 134 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 SCARA3Q6AZY7 606 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 ANKS3Q6ZW76 656 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 FILIP1Q7Z7B0 1213 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 TMEM105Q8N8V8 129 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 CXorf38Q8TB03 319 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 HPDLQ96IR7 371 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 SRRTQ9BXP5 876 aaKnown RBP12.45□□□□□ -0.42
CTSA-209ENST00000493522 METTL14Q9HCE5 456 aaKnown RBP12.45□□□□□ -0.42
CTSA-209ENST00000493522 MTRRQ9UBK8 725 aa12.45□□□□□ -0.42
CTSA-209ENST00000493522 TIMM13Q9Y5L4 95 aaPredicted RBP12.45□□□□□ -0.42
CTSA-209ENST00000493522 RIF1Q5UIP0 2472 aaKnown RBP12.44□□□□□ -0.42
CTSA-209ENST00000493522 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 H7C4K7 107 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 CYB561D2O14569 222 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 IKBKBO14920 756 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 STX10O60499 249 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 HUS1O60921 280 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 LILRB3O75022 631 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 GNA14O95837 355 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 C4BPAP04003 597 aaKnown RBP12.44□□□□□ -0.42
CTSA-209ENST00000493522 ASGR2P07307 311 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 WEE2P0C1S8 567 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 EPCAMP16422 314 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 TYMPP19971 482 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 ERCC5P28715 1186 aaPredicted RBP12.44□□□□□ -0.42
CTSA-209ENST00000493522 MYL6P60660 151 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 YWHAHQ04917 246 aaPredicted RBP12.44□□□□□ -0.42
CTSA-209ENST00000493522 TYRO3Q06418 890 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 PPP3CAQ08209 521 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 NCOA4Q13772 614 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 NFKBIBQ15653 356 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 ZNF699Q32M78 642 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 ZACNQ401N2 412 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 CTXN3Q4LDR2 81 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 ASTLQ6HA08 431 aaPredicted RBP12.44□□□□□ -0.42
CTSA-209ENST00000493522 OVOS1Q6IE37 1185 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 C11orf57Q6ZUT1 292 aaPredicted RBP12.44□□□□□ -0.42
CTSA-209ENST00000493522 SV2AQ7L0J3 742 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 FRMD5Q7Z6J6 570 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 METTL23Q86XA0 190 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 CREBRFQ8IUR6 639 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 GPR65Q8IYL9 337 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 C12orf76Q8N812 135 aaPredicted RBP12.44□□□□□ -0.42
CTSA-209ENST00000493522 LNX1Q8TBB1 728 aaPredicted RBP12.44□□□□□ -0.42
CTSA-209ENST00000493522 ACSF2Q96CM8 615 aaPredicted RBP12.44□□□□□ -0.42
CTSA-209ENST00000493522 BORCS6Q96GS4 357 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 CNOT6LQ96LI5 555 aaKnown RBP12.44□□□□□ -0.42
CTSA-209ENST00000493522 SFXN1Q9H9B4 322 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 RXFP1Q9HBX9 757 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 TMEM8AQ9HCN3 771 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 FNIP2Q9P278 1114 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 LIMD1Q9UGP4 676 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 SNX9Q9Y5X1 595 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 CDY1Q9Y6F8 540 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 DCHS1Q96JQ0 3298 aa12.44□□□□□ -0.42
CTSA-209ENST00000493522 SPTBN4Q9H254 2564 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 SYCE3A1L190 88 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms