RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 PLEKHA7Q6IQ23 1121 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 CC2D1AQ6P1N0 951 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 ALKAL1Q6UXT8 129 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 RNF180Q86T96 592 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 HACE1Q8IYU2 909 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 PXYLP1Q8TE99 480 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 WHAMMQ8TF30 809 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 TFAP2BQ92481 460 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 WNT8BQ93098 351 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 TMEM176AQ96HP8 235 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 RNPC3Q96LT9 517 aaKnown RBP9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 NAP1L3Q99457 506 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 ELOVL4Q9GZR5 314 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 HMGXB4Q9UGU5 601 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 TTC7AQ9ULT0 858 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 BARX2Q9UMQ3 279 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 IPPQ9Y573 584 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 MYO1FO00160 1098 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 SEC31AO94979 1220 aaKnown RBP9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 VDRP11473 427 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 CYP3A5P20815 502 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 CTNNA1P35221 906 aaKnown RBP9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 SLC1A1P43005 524 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 RNASE9P60153 205 aaKnown RBP9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 TAP1Q03518 808 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 ARHGEF6Q15052 776 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 PTGISQ16647 500 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 XKR4Q5GH76 650 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 DENND1BQ6P3S1 775 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 DNAJC24Q6P3W2 148 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 PHLDB2Q86SQ0 1253 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 SLC4A11Q8NBS3 891 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 SMG8Q8ND04 991 aaKnown RBP9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 SLAIN1Q8ND83 568 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 HNRNPLLQ8WVV9 542 aaKnown RBP9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 KRT35Q92764 455 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 CD101Q93033 1021 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 C18orf25Q96B23 403 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 TWNKQ96RR1 684 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 CXCL16Q9H2A7 254 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 LHX5Q9H2C1 402 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 CHST12Q9NRB3 414 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 PARVAQ9NVD7 372 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 ZNF446Q9NWS9 450 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 KLK14Q9P0G3 267 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 LCMT1Q9UIC8 334 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 TMEM59LQ9UK28 342 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 STRIP2Q9ULQ0 834 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 ST3GAL5Q9UNP4 418 aa9.71□□□□□ -0.86
SMARCC1-208ENST00000492896 TSC2P49815 1807 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 GOLGA6L10A0A0M3HER8 536 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 SMIM28A0A1B0GU29 152 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 MOXD2PA6NHM9 499 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 M0QYV0 167 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 KRIT1O00522 736 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 PPEF2O14830 753 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 GPR182O15218 404 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 ATP8B1O43520 1251 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 RRP9O43818 475 aaKnown RBP9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 FKTNO75072 461 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 MICAL2O94851 1124 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 PROSCO94903 275 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 ZRANB2O95218 330 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 FGGP02679 453 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 CHRNA1P02708 482 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 INHAP05111 366 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 HSPA6P17066 643 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 MAN1A1P33908 653 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 THPOP40225 353 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 PNPLA4P41247 253 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 MARCKSL1P49006 195 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 VEGFBP49765 207 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 NDST1P52848 882 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 PRMT2P55345 433 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 RWDD2BP57060 319 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 NFX1Q12986 1120 aaKnown RBP9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 PTK7Q13308 1070 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 ZNF211Q13398 564 aaPredicted RBP9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 ORC1Q13415 861 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 MAMLD1Q13495 774 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 ITGA7Q13683 1181 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 STILQ15468 1287 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 LONRF2Q1L5Z9 754 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 SV2CQ496J9 727 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 C2CD6Q53TS8 623 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 SGO2Q562F6 1265 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 LLGL2Q6P1M3 1020 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 ERICH1Q86X53 443 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 CPNE8Q86YQ8 564 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 KLHL7Q8IXQ5 586 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 FEZF2Q8TBJ5 459 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 ALG3Q92685 438 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 KRT12Q99456 494 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 LRRC1Q9BTT6 524 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 PLVAPQ9BX97 442 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 NT5C1AQ9BXI3 368 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 DNAI2Q9GZS0 605 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 ERVK-5Q9HDB9 667 aa9.7□□□□□ -0.86
SMARCC1-208ENST00000492896 FAM105AQ9NUU6 356 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms