RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 WNT11O96014 354 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 GASTP01350 101 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 LRG1P02750 347 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 THP07101 528 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 SUMO3P55854 103 aaPredicted RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 PPFIA1Q13136 1202 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 PDE1CQ14123 709 aaPredicted RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 ADCK5Q3MIX3 580 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 TRMT10BQ6PF06 316 aaKnown RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 APOA5Q6Q788 366 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 RPTNQ6XPR3 784 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 RNF44Q7L0R7 432 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 GPC2Q8N158 579 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 MPP5Q8N3R9 675 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 PCSK9Q8NBP7 692 aaKnown RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 BRI3BPQ8WY22 251 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 INTS4Q96HW7 963 aaKnown RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 BCAS3Q9H6U6 928 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 C14orf93Q9H972 538 aaKnown RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 MYBBP1AQ9BQG0 1328 aaKnown RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 PSME4Q14997 1843 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 PROB1E7EW31 1015 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 BIN1O00499 593 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 MTHFD1P11586 935 aaKnown RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 CD83Q01151 205 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 DUSP2Q05923 314 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 MSMPQ1L6U9 139 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 PLEKHN1Q494U1 663 aaPredicted RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 LMBRD2Q68DH5 695 aaPredicted RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 TMEM151AQ8N4L1 468 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 FANCBQ8NB91 859 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 NSUN6Q8TEA1 469 aaKnown RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 KIAA1191Q96A73 305 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 MPP4Q96JB8 637 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 LRFN3Q9BTN0 628 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 RNF32Q9H0A6 362 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 ZMAT3Q9HA38 289 aaKnown RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 RSAD1Q9HA92 442 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 BCO1Q9HAY6 547 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 PCMTD2Q9NV79 361 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 C9orf78Q9NZ63 289 aaPredicted RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 CFAP97Q9P2B7 532 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 EBF1Q9UH73 591 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 CCNL1Q9UK58 526 aaPredicted RBP3.53□□□□□ -1.84
SNX13-209ENST00000492626 CASP8AP2Q9UKL3 1982 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 PIP5K1CO60331 668 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 HMGCRP04035 888 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 RAP2AP10114 183 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 GYPEP15421 78 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 DDCP20711 480 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 MALP21145 153 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 KCNA3P22001 575 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 MRE11P49959 708 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 PLS1Q14651 629 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 TMEM31Q5JXX7 168 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 MPZL3Q6UWV2 235 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 UBE2Q1Q7Z7E8 422 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 CNTROBQ8N137 903 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 TTLL6Q8N841 843 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 OR7D4Q8NG98 312 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 SNX33Q8WV41 574 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 FAM167BQ9BTA0 163 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 SIK2Q9H0K1 926 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 MAGEL2Q9UJ55 1249 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 TMPRSS11EQ9UL52 423 aa3.53□□□□□ -1.84
SNX13-209ENST00000492626 MAST2Q6P0Q8 1798 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 A0A087WV62 115 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 RASSF9O75901 435 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 MPIG6BO95866 241 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 MYL4P12829 197 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 TYRP14679 529 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 CTSSP25774 331 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 KRT9P35527 623 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 KCNQ1P51787 676 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 CASP5P51878 434 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 FLYWCH1Q4VC44 716 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 AMOTQ4VCS5 1084 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 TLDC1Q6P9B6 456 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 SLC41A1Q8IVJ1 513 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 STPG3Q8N7X2 389 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 DTX3Q8N9I9 347 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 LPPQ93052 612 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 STK31Q9BXU1 1019 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 RNF186Q9NXI6 227 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 HSPBP1Q9NZL4 362 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 ZNF69Q9UC07 566 aa3.53□□□□□ -1.85
SNX13-209ENST00000492626 COL11A1P12107 1806 aaPredicted RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 ALDH1A2O94788 518 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 INMTO95050 263 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 CELA3BP08861 270 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 GEMIN4P57678 1058 aaKnown RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 ERVFC1P60507 584 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 ZNF200P98182 395 aaPredicted RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 CACNB2Q08289 660 aaPredicted RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 PDILTQ8N807 584 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 ATP11CQ8NB49 1132 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 PTPN18Q99952 460 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 C22orf23Q9BZE7 217 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 LDAHQ9H6V9 325 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 TLR9Q9NR96 1032 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms