RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 RALGPS2Q86X27 583 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-212ENST00000492407 METTL23Q86XA0 190 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 THEM5Q8N1Q8 247 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 RAD54LQ92698 747 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 SENP8Q96LD8 212 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 FIZ1Q96SL8 496 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 DNAJC25Q9H1X3 360 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 UPF2Q9HAU5 1272 aaKnown RBP9.89□□□□□ -0.83
HDAC3-212ENST00000492407 BLOC1S4Q9NUP1 217 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 SEL1LQ9UBV2 794 aa9.89□□□□□ -0.83
HDAC3-212ENST00000492407 SMG5Q9UPR3 1016 aaKnown RBP9.89□□□□□ -0.83
HDAC3-212ENST00000492407 EP300Q09472 2414 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-212ENST00000492407 FRYLO94915 3013 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 MYH15Q9Y2K3 1946 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 NPHP3-ACAD11A0A0J9YXS1 232 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 A0A1W2PRU2 124 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 MYBPHLA2RUH7 354 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 K7ENM7 598 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 DPYSL4O14531 572 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 IL18RAPO95256 599 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 KRT18P05783 430 aaKnown RBP9.88□□□□□ -0.83
HDAC3-212ENST00000492407 CDC25CP30307 473 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 PNPLA4P41247 253 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 TMEM132DQ14C87 1099 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 VEPH1Q14D04 833 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 LAIR1Q6GTX8 287 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 JADE1Q6IE81 842 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 ARID3BQ8IVW6 561 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-212ENST00000492407 DCLK2Q8N568 766 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 KRI1Q8N9T8 703 aaKnown RBP9.88□□□□□ -0.83
HDAC3-212ENST00000492407 SPPL2BQ8TCT7 592 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 LARP4BQ92615 738 aaKnown RBP9.88□□□□□ -0.83
HDAC3-212ENST00000492407 PLIN2Q99541 437 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 ZCWPW1Q9H0M4 648 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 SLITRK6Q9H5Y7 841 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 TASP1Q9H6P5 420 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 THG1LQ9NWX6 298 aaKnown RBP9.88□□□□□ -0.83
HDAC3-212ENST00000492407 STK17AQ9UEE5 414 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 GMEB2Q9UKD1 530 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 RAB23Q9ULC3 237 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 SMC3Q9UQE7 1217 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 TIMM13Q9Y5L4 95 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-212ENST00000492407 MORC2Q9Y6X9 1032 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-212ENST00000492407 DCHS1Q96JQ0 3298 aa9.88□□□□□ -0.83
HDAC3-212ENST00000492407 FANCMQ8IYD8 2048 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 OTOGLQ3ZCN5 2332 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 RETP07949 1114 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 OR4Q2P0C623 313 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 PLCG1P19174 1290 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 PDCP20941 246 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 CCNE1P24864 410 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 DDX6P26196 483 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC3-212ENST00000492407 TAF6P49848 677 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 AMPD2Q01433 879 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-212ENST00000492407 SPAG1Q07617 926 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 MCM6Q14566 821 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 RSPO4Q2I0M5 234 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-212ENST00000492407 ADALQ6DHV7 355 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 SLC39A4Q6P5W5 647 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 GAREM2Q75VX8 874 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 ZNF720Q7Z2F6 126 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 DCP1BQ8IZD4 617 aaKnown RBP9.87□□□□□ -0.83
HDAC3-212ENST00000492407 ATAD1Q8NBU5 361 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 RASSF8Q8NHQ8 419 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 SPATA18Q8TC71 538 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 PGLYRP2Q96PD5 576 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 GCNAQ96QF7 691 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 RTKNQ9BST9 563 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 MKNK1Q9BUB5 465 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 STRA6Q9BX79 667 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 CRISPLD1Q9H336 500 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 ATXN3LQ9H3M9 355 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 CCDC39Q9UFE4 941 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 AGO2Q9UKV8 859 aaKnown RBP9.87□□□□□ -0.83
HDAC3-212ENST00000492407 NDRG2Q9UN36 371 aaKnown RBP9.87□□□□□ -0.83
HDAC3-212ENST00000492407 EXOC7Q9UPT5 735 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 SLC27A5Q9Y2P5 690 aa9.87□□□□□ -0.83
HDAC3-212ENST00000492407 CCDC163A0A0D9SF12 145 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 KPNA7A9QM74 516 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 NRG2O14511 850 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-212ENST00000492407 CYB561D2O14569 222 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 LDHAP00338 332 aaKnown RBP9.86□□□□□ -0.83
HDAC3-212ENST00000492407 HAPLN1P10915 354 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-212ENST00000492407 GJA1P17302 382 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 GAP43P17677 238 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 TGM1P22735 817 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 GABRR2P28476 465 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 ANP32AP39687 249 aaKnown RBP9.86□□□□□ -0.83
HDAC3-212ENST00000492407 KPNA1P52294 538 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-212ENST00000492407 ALCAMQ13740 583 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 KARSQ15046 597 aaKnown RBP9.86□□□□□ -0.83
HDAC3-212ENST00000492407 SF3A1Q15459 793 aaKnown RBP9.86□□□□□ -0.83
HDAC3-212ENST00000492407 NFE2Q16621 373 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-212ENST00000492407 SV2CQ496J9 727 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 SLC39A12Q504Y0 691 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 TSSK4Q6SA08 328 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 LONP2Q86WA8 852 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 FAM200AQ8TCP9 573 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 BPIFB1Q8TDL5 484 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms