RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 KCNN1Q92952 543 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 PGLYRP2Q96PD5 576 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 TMEM209Q96SK2 561 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 AVENQ9NQS1 362 aaPredicted RBP11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 LMBRD1Q9NUN5 540 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 TBC1D7Q9P0N9 293 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 KANSL1LA0AUZ9 987 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 FRMD3A2A2Y4 597 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 ANKRD63C9JTQ0 380 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 SPTLC1O15269 473 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 ECI2O75521 394 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 LMNAP02545 664 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 CLTAP09496 248 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 SP9P0CG40 484 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 CPB1P15086 417 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 TARSP26639 723 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 PPP1R2P41236 205 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 CDR1P51861 262 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 SNRPFP62306 86 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 PPP2R3AQ06190 1150 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 PUM1Q14671 1186 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 KCNB1Q14721 858 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 KMT5BQ4FZB7 885 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 ZC2HC1CQ53FD0 456 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 FAM78AQ5JUQ0 283 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 FAM26FQ5R3K3 315 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 TPGS2Q68CL5 300 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 TPRG1Q6ZUI0 275 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 C1orf210Q8IVY1 113 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 TTC9BQ8N6N2 239 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 BEST2Q8NFU1 509 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 SYAP1Q96A49 352 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 DNAJC25Q9H1X3 360 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 PLEKHA5Q9HAU0 1116 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 HEBP1Q9NRV9 189 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 AFF4Q9UHB7 1163 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 UBQLN1Q9UMX0 589 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 YIPF1Q9Y548 306 aa11.92□□□□□ -0.5
TMEM39A-211ENST00000491685 CEP250Q9BV73 2442 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 NCOR2Q9Y618 2525 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 OTOGLQ3ZCN5 2332 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 A0A0B4J269 797 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 OGTO15294 1046 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 EIF3DO15371 548 aaKnown RBP eCLIP11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 LDHAP00338 332 aaKnown RBP11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 ADRB2P07550 413 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 MYL4P12829 197 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 PRKCQQ04759 706 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 YWHAHQ04917 246 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 DPYDQ12882 1025 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 STIM1Q13586 685 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 UBXN2BQ14CS0 331 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 JADE1Q6IE81 842 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 VITQ6UXI7 678 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 PDZD4Q76G19 769 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 TMC8Q8IU68 726 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 MAP4K3Q8IVH8 894 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 APPL2Q8NEU8 664 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 ZNF507Q8TCN5 953 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 ELSPBP1Q96BH3 223 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 RSPRY1Q96DX4 576 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 ASB16Q96NS5 453 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 MSTO1Q9BUK6 570 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 LRRC3Q9BY71 257 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 LTB4R2Q9NPC1 389 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 GDE1Q9NZC3 331 aa11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 CPSF3Q9UKF6 684 aaKnown RBP11.91□□□□□ -0.5
TMEM39A-211ENST00000491685 FAM170BA6NMN3 283 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 KIAA0391O15091 583 aaKnown RBP11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 XPOTO43592 962 aaKnown RBP11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 SOAT2O75908 522 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 RHOBTB3O94955 611 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 OAZ2O95190 189 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 CYP3A5P20815 502 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 VIPR2P41587 438 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 ACOT2P49753 483 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 EPHA5P54756 1037 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 WNT7BP56706 349 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 PNOCQ13519 176 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 TEAD2Q15562 447 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 STXBP5Q5T5C0 1151 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 L1TD1Q5T7N2 865 aaKnown RBP11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 SPATA1Q5VX52 437 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 DSTYKQ6XUX3 929 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 HS2ST1Q7LGA3 356 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 GRAMD1CQ8IYS0 662 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 KIAA2013Q8IYS2 634 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 OR10T2Q8NGX3 314 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 GOLGA5Q8TBA6 731 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 SHKBP1Q8TBC3 707 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 SHDQ96IW2 340 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 FAM84AQ96KN4 292 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 TSPAN18Q96SJ8 248 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 OXCT2Q9BYC2 517 aaPredicted RBP11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 RPF1Q9H9Y2 349 aaKnown RBP11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 ZNF334Q9HCZ1 680 aaPredicted RBP11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 SLC39A2Q9NP94 309 aa11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
TMEM39A-211ENST00000491685 PCDHA5Q9Y5H7 936 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms