RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SDHBP21912 280 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 IGFBP6P24592 240 aaPredicted RBP11.2□□□□□ -0.62
TTC28-207ENST00000490475 CASP1P29466 404 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 PNPLA4P41247 253 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 ID4P47928 161 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 SEZ6Q53EL9 994 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 FAM78AQ5JUQ0 283 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 TANGO2Q6ICL3 276 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 ZNF720Q7Z2F6 126 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 SFR1Q86XK3 245 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 MFSD6LQ8IWD5 586 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 YAF2Q8IY57 180 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 GRAMD1CQ8IYS0 662 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 ZNF560Q96MR9 790 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 GCNAQ96QF7 691 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 HINFPQ9BQA5 517 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 CUEDC2Q9H467 287 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 PANK4Q9NVE7 773 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 ZSCAN32Q9NX65 697 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 OBP2AQ9NY56 170 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 CEP72Q9P209 647 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 SERTAD1Q9UHV2 236 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 AGO2Q9UKV8 859 aaKnown RBP11.2□□□□□ -0.62
TTC28-207ENST00000490475 STYXL1Q9Y6J8 313 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 PATJQ8NI35 1801 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 MYO15AQ9UKN7 3530 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 PIRO00625 290 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 DPYSL4O14531 572 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 MEFVO15553 781 aaPredicted RBP11.19□□□□□ -0.62
TTC28-207ENST00000490475 FCARP24071 287 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 WEE1P30291 646 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 TNFSF9P41273 254 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 AFMP43652 599 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 TAF6P49848 677 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 NDUFA8P51970 172 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 C9orf57Q5W0N0 161 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 JADE1Q6IE81 842 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 CENPPQ6IPU0 288 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 ZSCAN18Q8TBC5 510 aaPredicted RBP11.19□□□□□ -0.62
TTC28-207ENST00000490475 SPPL2BQ8TCT7 592 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 CSGALNACT1Q8TDX6 532 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 CACTINQ8WUQ7 758 aaKnown RBP11.19□□□□□ -0.62
TTC28-207ENST00000490475 PSMG2Q969U7 264 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 TCEAL4Q96EI5 215 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 SENP8Q96LD8 212 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 C7orf25Q9BPX7 421 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 TRIM9Q9C026 710 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 LRRC27Q9C0I9 530 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 HAPLN2Q9GZV7 340 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 BLZF1Q9H2G9 400 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 TNMDQ9H2S6 317 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 IKZF4Q9H2S9 585 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 C8orf33Q9H7E9 229 aaPredicted RBP11.19□□□□□ -0.62
TTC28-207ENST00000490475 ZNF334Q9HCZ1 680 aaPredicted RBP11.19□□□□□ -0.62
TTC28-207ENST00000490475 HEBP1Q9NRV9 189 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 HPSEQ9Y251 543 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 R4GN57 208 aa11.19□□□□□ -0.62
TTC28-207ENST00000490475 TCHHQ07283 1943 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 WDR87Q6ZQQ6 2873 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 ANO9A1A5B4 782 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 MTMR11A4FU01 709 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 SOBPA7XYQ1 873 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 KIAA0391O15091 583 aaKnown RBP11.18□□□□□ -0.62
TTC28-207ENST00000490475 CHADO15335 359 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 ACTN4O43707 911 aaKnown RBP11.18□□□□□ -0.62
TTC28-207ENST00000490475 SLFN14P0C7P3 912 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 TARSP26639 723 aaKnown RBP11.18□□□□□ -0.62
TTC28-207ENST00000490475 CDC25CP30307 473 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 GDI1P31150 447 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 CCR3P51677 355 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 PLCB2Q00722 1185 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 AMPD3Q01432 767 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 CSTF1Q05048 431 aaKnown RBP11.18□□□□□ -0.62
TTC28-207ENST00000490475 SPAG1Q07617 926 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 DUSP4Q13115 394 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 LRRC32Q14392 662 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 TAF12Q16514 161 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 SV2CQ496J9 727 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 ARHGAP29Q52LW3 1261 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 STXBP4Q6ZWJ1 553 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 DCP1BQ8IZD4 617 aaKnown RBP11.18□□□□□ -0.62
TTC28-207ENST00000490475 ST13P5Q8NFI4 369 aaPredicted RBP11.18□□□□□ -0.62
TTC28-207ENST00000490475 SPATA18Q8TC71 538 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 FAM200AQ8TCP9 573 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 POMGNT1Q8WZA1 660 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 FAM3CQ92520 227 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 HPS3Q969F9 1004 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 PAGE5Q96GU1 130 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 ACCSQ96QU6 501 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 FGFBP2Q9BYJ0 223 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 CHRDQ9H2X0 955 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 GOLPH3LQ9H4A5 285 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 MRPL44Q9H9J2 332 aaKnown RBP11.18□□□□□ -0.62
TTC28-207ENST00000490475 PRMT8Q9NR22 394 aaPredicted RBP11.18□□□□□ -0.62
TTC28-207ENST00000490475 OLFML3Q9NRN5 406 aa11.18□□□□□ -0.62
TTC28-207ENST00000490475 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
TTC28-207ENST00000490475 R3HCC1Q9Y3T6 440 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms