RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RNF207Q6ZRF8 634 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 LRRC55Q6ZSA7 311 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 PPP1R32Q7Z5V6 425 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 SESTD1Q86VW0 696 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 NSUN7Q8NE18 718 aaKnown RBP4.84□□□□□ -1.63
CD46-216ENST00000490278 FAM46DQ8NEK8 389 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 PARD3BQ8TEW8 1205 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 NMD3Q96D46 503 aaKnown RBP4.84□□□□□ -1.63
CD46-216ENST00000490278 MSLNLQ96KJ4 702 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 TRIB1Q96RU8 372 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 STRBPQ96SI9 672 aaKnown RBP4.84□□□□□ -1.63
CD46-216ENST00000490278 TBCBQ99426 244 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 ZNF768Q9H5H4 540 aaKnown RBP4.84□□□□□ -1.63
CD46-216ENST00000490278 SMURF2Q9HAU4 748 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 AKIP1Q9NQ31 210 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 KCNE5Q9UJ90 142 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 CORO2BQ9UQ03 480 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 MTO1Q9Y2Z2 717 aaKnown RBP4.84□□□□□ -1.63
CD46-216ENST00000490278 TMX2Q9Y320 296 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 NEU2Q9Y3R4 380 aa4.84□□□□□ -1.63
CD46-216ENST00000490278 TRIM43BA6NCK2 446 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 VPS4BO75351 444 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 KCNA2P16389 499 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 SLC11A2P49281 568 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 PRIM2P49643 509 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 UCP3P55916 312 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 RHBDL3P58872 404 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 SLC25A3Q00325 362 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 LONRF1Q17RB8 773 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 SPDYE7PQ495Y7 208 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 B3GNTL1Q67FW5 361 aaPredicted RBP4.83□□□□□ -1.64
CD46-216ENST00000490278 TMEM132CQ8N3T6 1108 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 ZNF276Q8N554 614 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 SLC15A4Q8N697 577 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 SAMD3Q8N6K7 520 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 DNAJC5GQ8N7S2 189 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 MAML1Q92585 1016 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 TRIM43Q96BQ3 446 aaPredicted RBP4.83□□□□□ -1.64
CD46-216ENST00000490278 LRIG1Q96JA1 1093 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 TNIP3Q96KP6 325 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 PLEKHG4BQ96PX9 1271 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 MYD88Q99836 296 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 ELAC2Q9BQ52 826 aaKnown RBP4.83□□□□□ -1.64
CD46-216ENST00000490278 SPATA5L1Q9BVQ7 753 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 UNKQ9C0B0 810 aaKnown RBP4.83□□□□□ -1.64
CD46-216ENST00000490278 ZNF518BQ9C0D4 1074 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 PNPLA8Q9NP80 782 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 MRPS18AQ9NVS2 196 aaKnown RBP4.83□□□□□ -1.64
CD46-216ENST00000490278 ETAA1Q9NY74 926 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 VSX1Q9NZR4 365 aaPredicted RBP4.83□□□□□ -1.64
CD46-216ENST00000490278 COL20A1Q9P218 1284 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 CTTNBP2NLQ9P2B4 639 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 XPR1Q9UBH6 696 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 HESX1Q9UBX0 185 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 NOX1Q9Y5S8 564 aa4.83□□□□□ -1.64
CD46-216ENST00000490278 A0A087WWL8 130 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 MARCH11A6NNE9 402 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 E7ENX8 843 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 KPNA5O15131 536 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 TM4SF4P48230 202 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 ALDH5A1P51649 535 aaPredicted RBP4.82□□□□□ -1.64
CD46-216ENST00000490278 CASP5P51878 434 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 RPS16P62249 146 aaKnown RBP4.82□□□□□ -1.64
CD46-216ENST00000490278 CXADRP78310 365 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 TAP2Q03519 686 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 ZNF543Q08ER8 600 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 BEAN1Q3B7T3 259 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 ARMC6Q6NXE6 501 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 SLC30A10Q6XR72 485 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 PRRT2Q7Z6L0 340 aaPredicted RBP4.82□□□□□ -1.64
CD46-216ENST00000490278 CLNKQ7Z7G1 428 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 MPP5Q8N3R9 675 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 Q8NA96 180 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 PSD4Q8NDX1 1056 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 POC1BQ8TC44 478 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 ZNF483Q8TF39 744 aaPredicted RBP4.82□□□□□ -1.64
CD46-216ENST00000490278 SLC25A43Q8WUT9 341 aaPredicted RBP4.82□□□□□ -1.64
CD46-216ENST00000490278 SLC39A13Q96H72 371 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 BOD1Q96IK1 185 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 MOGAT1Q96PD6 335 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 A1CFQ9NQ94 594 aaKnown RBP4.82□□□□□ -1.64
CD46-216ENST00000490278 MAP3K2Q9Y2U5 619 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 RAD54BQ9Y620 910 aa4.82□□□□□ -1.64
CD46-216ENST00000490278 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 PRAMEF33A0A0G2JMD5 474 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 C1QTNF3-AMACRE9PGA6 284 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 TOR1BO14657 336 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 PRAMEF10O60809 474 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 PPFIA4O75335 1185 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 PEX14O75381 377 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 SUN1O94901 812 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 IL18RAPO95256 599 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 NDUFA10O95299 355 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 PEX11BO96011 259 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 C1SP09871 688 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 CYP2C9P11712 490 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 LAG3P18627 525 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 NR4A1P22736 598 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 DDX6P26196 483 aaKnown RBP eCLIP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms