RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, human

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-218	ENST00000490032	ZNF785	A8K8V0	405 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	VWC2L	B2RUY7	222 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	DTNB	O60941	627 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	SOAT2	O75908	522 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	POU2F2	P09086	479 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	RARB	P10826	455 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	ITPKB	P27987	946 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	SOX10	P56693	466 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	PSMC1	P62191	440 aa	Known RBP	4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	NOG	Q13253	232 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	TUBB3	Q13509	450 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	ZKSCAN2	Q63HK3	967 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	USP45	Q70EL2	814 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	B3GALNT2	Q8NCR0	500 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	ZCRB1	Q8TBF4	217 aa	Known RBP	4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	CNPPD1	Q9BV87	410 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	C1orf43	Q9BWL3	253 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	BRINP2	Q9C0B6	783 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	KLC4	Q9NSK0	619 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	ZDHHC8	Q9ULC8	765 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	PCDHA3	Q9Y5H8	950 aa		4.98	□□□□□ -1.61
HMGN1-218	ENST00000490032	ADGRA2	Q96PE1	1338 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	SNUPN	O95149	360 aa	Known RBP	4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	CHRM2	P08172	466 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	NDUFV1	P49821	464 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	ZNF135	P52742	658 aa	Predicted RBP	4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	PROK1	P58294	105 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	FOXF2	Q12947	444 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	AKNAD1	Q5T1N1	836 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	HEATR3	Q7Z4Q2	680 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	PPP1R32	Q7Z5V6	425 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	FAM109A	Q8N4B1	249 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	CPA6	Q8N4T0	437 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	RGMA	Q96B86	450 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	PBK	Q96KB5	322 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	AMBRA1	Q9C0C7	1298 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	SIK2	Q9H0K1	926 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	MRPL46	Q9H2W6	279 aa	Known RBP	4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	TCF7L1	Q9HCS4	588 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	HOMER2	Q9NSB8	354 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	MRPS18A	Q9NVS2	196 aa	Known RBP	4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	AGAP1	Q9UPQ3	857 aa		4.97	□□□□□ -1.61
HMGN1-218	ENST00000490032	LINC00473	A8K010	186 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032		F5H697	171 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	INO80B-WBP1	J3KQ70	363 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	TRIAP1	O43715	76 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	GPD1	P21695	349 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	TOB1	P50616	345 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	BRDT	Q58F21	947 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	TAF2	Q6P1X5	1199 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	SLC30A10	Q6XR72	485 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	ZNF788	Q6ZQV5	615 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	SRRM1	Q8IYB3	904 aa	Known RBP	4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	PSD4	Q8NDX1	1056 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	FBXO41	Q8TF61	875 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	ANKS1A	Q92625	1134 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	CHMP4C	Q96CF2	233 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	FAM167A	Q96KS9	214 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	INO80B	Q9C086	356 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	SMOC2	Q9H3U7	446 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	CPNE5	Q9HCH3	593 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	ABCF2	Q9UG63	623 aa		4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGN1-218	ENST00000490032	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	FTL	P02792	175 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	TYR	P14679	529 aa		4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	AKAP5	P24588	427 aa		4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	MAP2K6	P52564	334 aa		4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	LRCH2	Q5VUJ6	765 aa		4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	SH2D3C	Q8N5H7	860 aa		4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	DDX17	Q92841	729 aa	Known RBP	4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	RFK	Q969G6	155 aa		4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	ALG8	Q9BVK2	526 aa		4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	KMT5A	Q9NQR1	393 aa		4.95	□□□□□ -1.62
HMGN1-218	ENST00000490032	WIPF3	A6NGB9	483 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	URI1	O94763	535 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	KIF20A	O95235	890 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	RHO	P08100	348 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	PHKA1	P46020	1223 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	HNRNPA0	Q13151	305 aa	Known RBP	4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	PTPRO	Q16827	1216 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	PGS1	Q32NB8	556 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	TSTD2	Q5T7W7	516 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	PTF1A	Q7RTS3	328 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	USP37	Q86T82	979 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	PPP1R3B	Q86XI6	285 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	HSPBAP1	Q96EW2	488 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	NUP88	Q99567	741 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	GTPBP4	Q9BZE4	634 aa	Known RBP	4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	SLAMF7	Q9NQ25	335 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	LMBRD1	Q9NUN5	540 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	ADAM21	Q9UKJ8	722 aa		4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	LUC7L2	Q9Y383	392 aa	Known RBP	4.94	□□□□□ -1.62
HMGN1-218	ENST00000490032	CGB1	A6NKQ9	187 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	IL33	O95760	270 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	CDK4	P11802	303 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	ITGAL	P20701	1170 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	LMO1	P25800	156 aa		4.93	□□□□□ -1.62
HMGN1-218	ENST00000490032	NKX6-1	P78426	367 aa	Predicted RBP	4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms