RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PRAMEF14Q5SWL7 426 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 MYCT1Q8N699 235 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 REPS2Q8NFH8 660 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 OR10H5Q8NGA6 315 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 TGFBRAP1Q8WUH2 860 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 JADE3Q92613 823 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 MYEOVQ96EZ4 313 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 CCDC138Q96M89 665 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 SLC2A13Q96QE2 648 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 DCLRE1CQ96SD1 692 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 ALDH8A1Q9H2A2 487 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 ALG13Q9NP73 1137 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 NMRK2Q9NPI5 230 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 AKIP1Q9NQ31 210 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 MKS1Q9NXB0 559 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 POGKQ9P215 609 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 LAMC3Q9Y6N6 1575 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 RPTORQ8N122 1335 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 J3KRW8 73 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 NCK2O43639 380 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 PQBP1O60828 265 aaKnown RBP3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 ULK1O75385 1050 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 ZFPL1O95159 310 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 NDUFA10O95299 355 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 CD4P01730 458 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 CAPN3P20807 821 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 ABCB4P21439 1286 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 ENPP1P22413 925 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 MCCP23508 829 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 PIK3CBP42338 1070 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 CASP2P42575 452 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 SESN3P58005 492 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 DDX10Q13206 875 aaKnown RBP3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 SEMA5AQ13591 1074 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 CCDC96Q2M329 555 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 PDCD4Q53EL6 469 aaKnown RBP3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 EFCAB12Q6NXP0 572 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 DRICH1Q6PGQ1 229 aaPredicted RBP3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 SDR16C5Q8N3Y7 309 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 FBXO18Q8NFZ0 1043 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 SLC35B2Q8TB61 432 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 DIS3LQ8TF46 1054 aaKnown RBP3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 TFAP2CQ92754 450 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 C1orf112Q9NSG2 853 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 GGA3Q9NZ52 723 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 PGAP2Q9UHJ9 254 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 CLCA2Q9UQC9 943 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 RABGAP1Q9Y3P9 1069 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 KIF21AQ7Z4S6 1674 aa3.78□□□□□ -1.8
DEPDC1-204ENST00000489862 TMEM200CA6NKL6 621 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 GOLGA8AA7E2F4 631 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 B5MCH6 92 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 RNASET2O00584 256 aaKnown RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 WNT10BO00744 389 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 B3GALT2O43825 422 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 AKR1B10O60218 316 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 TLR5O60602 858 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 ZBED1O96006 694 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 GASTP01350 101 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 HSP90AA1P07900 732 aaKnown RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 U2AF1L5P0DN76 240 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 PTPN7P35236 360 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 U2AF1Q01081 240 aaKnown RBP eCLIP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 ACAP2Q15057 778 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 BMT2Q1RMZ1 405 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 PRR16Q569H4 304 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 ATAT1Q5SQI0 421 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 METRNLQ641Q3 311 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 CCDC149Q6ZUS6 474 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 TBC1D1Q86TI0 1168 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 GRAMD1CQ8IYS0 662 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 BEND2Q8NDZ0 799 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 TSPEARQ8WU66 669 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 ZNF480Q8WV37 535 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 RIN2Q8WYP3 895 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 RIPOR3Q96MK2 946 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 ACAP3Q96P50 834 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 NUP88Q99567 741 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 LRFN3Q9BTN0 628 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 WDR11Q9BZH6 1224 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 QRSL1Q9H0R6 528 aaKnown RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 SERHL2Q9H4I8 314 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 SMC4Q9NTJ3 1288 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 RNF7Q9UBF6 113 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 DKK2Q9UBU2 259 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 MAP3K2Q9Y2U5 619 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 THOC2Q8NI27 1593 aaKnown RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 URB2Q14146 1524 aaKnown RBP3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 FANCD2Q9BXW9 1451 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 PDS5BQ9NTI5 1447 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 CNTNAP2Q9UHC6 1331 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 UNC119BA6NIH7 251 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 TRIM75PA6NK02 468 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 KPNA5O15131 536 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 FIBPO43427 364 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 TGFB3P10600 412 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 C5AR1P21730 350 aa3.77□□□□□ -1.81
DEPDC1-204ENST00000489862 CRHR1P34998 444 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms