RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 A0A1W2PQJ5 194 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 EPOPA6NHQ4 379 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 F8VZ95 297 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 H3BNC9 293 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 RNF225M0QZC1 329 aaPredicted RBP11.66□□□□□ -0.54
TFF3-203ENST00000489676 TBC1D4O60343 1298 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 OAZ2O95190 189 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 WEE2P0C1S8 567 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 TRIM21P19474 475 aaKnown RBP11.66□□□□□ -0.54
TFF3-203ENST00000489676 DNAJB1P25685 340 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 CDH8P55286 799 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 POLR2FP61218 127 aaKnown RBP11.66□□□□□ -0.54
TFF3-203ENST00000489676 DSG1Q02413 1049 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 CAMK1Q14012 370 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 FAM171A1Q5VUB5 890 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 ENOSF1Q7L5Y1 443 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 TMEM86AQ8N2M4 240 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 APPL2Q8NEU8 664 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 WHAMMQ8TF30 809 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 PIK3R5Q8WYR1 880 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 TIFAQ96CG3 184 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 B3GALT6Q96L58 329 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 FAM81BQ96LP2 452 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 TWNKQ96RR1 684 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 MMS19Q96T76 1030 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 SLC28A3Q9HAS3 691 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 CISHQ9NSE2 258 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 STK39Q9UEW8 545 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 DSEQ9UL01 958 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 MTUS1Q9ULD2 1270 aa11.66□□□□□ -0.54
TFF3-203ENST00000489676 ARHGEF37A1IGU5 675 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 SOX1O00570 391 aaPredicted RBP11.65□□□□□ -0.54
TFF3-203ENST00000489676 HCRTO43612 131 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 LILRB3O75022 631 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 PNMA6AP0CW24 399 aaPredicted RBP11.65□□□□□ -0.54
TFF3-203ENST00000489676 GLUD2P49448 558 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 MFAP3P55082 362 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 UBE3AQ05086 875 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 TRIM14Q14142 442 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 ARID5BQ14865 1188 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 DRAP1Q14919 205 aaPredicted RBP11.65□□□□□ -0.54
TFF3-203ENST00000489676 USP41Q3LFD5 358 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 VARS2Q5ST30 1063 aaKnown RBP11.65□□□□□ -0.54
TFF3-203ENST00000489676 KIAA0319Q5VV43 1072 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 E4F1Q66K89 784 aaPredicted RBP11.65□□□□□ -0.54
TFF3-203ENST00000489676 TMC6Q7Z403 805 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.65□□□□□ -0.54
TFF3-203ENST00000489676 FAM71AQ8IYT1 594 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 VPS52Q8N1B4 723 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 TTC39CQ8N584 583 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 FBXO22Q8NEZ5 403 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 OR10T2Q8NGX3 314 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 SPPL3Q8TCT6 385 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 IQCDQ96DY2 449 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
TFF3-203ENST00000489676 TTPALQ9BTX7 342 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 STK33Q9BYT3 514 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 EDEM3Q9BZQ6 932 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 ALG13Q9NP73 1137 aaKnown RBP11.65□□□□□ -0.54
TFF3-203ENST00000489676 MTRRQ9UBK8 725 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 MYO6Q9UM54 1294 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 BARX2Q9UMQ3 279 aaPredicted RBP11.65□□□□□ -0.54
TFF3-203ENST00000489676 STXBP5LQ9Y2K9 1186 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 EYSQ5T1H1 3165 aa11.65□□□□□ -0.54
TFF3-203ENST00000489676 PTPRDP23468 1912 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 TMEM265A0A087WTH1 108 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 FOXN3O00409 490 aaPredicted RBP11.64□□□□□ -0.55
TFF3-203ENST00000489676 FSCN2O14926 492 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 GRM6O15303 877 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 LPXNO60711 386 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 CLSTN1O94985 981 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 URODP06132 367 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 CTSAP10619 480 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 CD58P19256 250 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 LMO2P25791 158 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 NDST1P52848 882 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 RAD23BP54727 409 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 YWHAEP62258 255 aaKnown RBP11.64□□□□□ -0.55
TFF3-203ENST00000489676 KRT17Q04695 432 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 YWHAHQ04917 246 aaPredicted RBP11.64□□□□□ -0.55
TFF3-203ENST00000489676 RAPGEF1Q13905 1077 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 PTPN14Q15678 1187 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 ARHGAP44Q17R89 818 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 CCDC142Q17RM4 750 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 OVOS1Q6IE37 1185 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 PDXDC1Q6P996 788 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 PRSS55Q6UWB4 352 aaPredicted RBP11.64□□□□□ -0.55
TFF3-203ENST00000489676 RSPO2Q6UXX9 243 aaPredicted RBP11.64□□□□□ -0.55
TFF3-203ENST00000489676 UNC93AQ86WB7 457 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 SLC4A11Q8NBS3 891 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 LNX1Q8TBB1 728 aaPredicted RBP11.64□□□□□ -0.55
TFF3-203ENST00000489676 POF1BQ8WVV4 589 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 PKMYT1Q99640 499 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 NUP58Q9BVL2 599 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 ELOVL4Q9GZR5 314 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 DPEP3Q9H4B8 488 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 NLRC4Q9NPP4 1024 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 DDX43Q9NXZ2 648 aaKnown RBP11.64□□□□□ -0.55
TFF3-203ENST00000489676 CAPN11Q9UMQ6 739 aa11.64□□□□□ -0.55
TFF3-203ENST00000489676 IRAK3Q9Y616 596 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms