RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 SAGE1Q9NXZ1 904 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 TBX20Q9UMR3 447 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 GABRQQ9UN88 632 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 R3HDM2Q9Y2K5 976 aaKnown RBP10.4□□□□□ -0.74
NOD1-208ENST00000489614 CITO14578 2027 aa10.4□□□□□ -0.75
NOD1-208ENST00000489614 MAGEA13PA6NCF6 341 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 BOLA2-SMG1P6H3BVE0 249 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 CALUO43852 315 aaPredicted RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 AKAP3O75969 853 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 PROZP22891 400 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 NFKBIAP25963 317 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 HSD17B3P37058 310 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 PTDSS1P48651 473 aaKnown RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 CCNG1P51959 295 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 OXCT1P55809 520 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 SOX10P56693 466 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 CLDN10P78369 228 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 KRT71Q3SY84 523 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 DPP9Q86TI2 863 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 CASKIN2Q8WXE0 1202 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 TRIB2Q92519 343 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 DNAJC1Q96KC8 554 aaKnown RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 NUDCD1Q96RS6 583 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 SH2D3AQ9BRG2 576 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 HAPLN2Q9GZV7 340 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 RNPEPQ9H4A4 650 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 TMEM206Q9H813 350 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 MLXIPQ9HAP2 919 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 LRRC4CQ9HCJ2 640 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 LARSQ9P2J5 1176 aaKnown RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 TDRKHQ9Y2W6 561 aaKnown RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 PCDHB13Q9Y5F0 798 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 CENPFP49454 3210 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 TRIP11Q15643 1979 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 EIF3FO00303 357 aaPredicted RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 HBP1O60381 514 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 GCNT3O95395 438 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 MMEP08473 750 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 PYGMP11217 842 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 GNAZP19086 355 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 ZNF844Q08AG5 666 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 CAPSQ13938 189 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 ZNF484Q5JVG2 852 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 CCSAPQ6IQ19 270 aaPredicted RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 HAUS6Q7Z4H7 955 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 KSR1Q8IVT5 923 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 CD302Q8IX05 232 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 CYP4X1Q8N118 509 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 IFT43Q96FT9 208 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 KRT12Q99456 494 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 TSG101Q99816 390 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 SIKE1Q9BRV8 207 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 POLR3FQ9H1D9 316 aaPredicted RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 PFDN4Q9NQP4 134 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 INIPQ9NRY2 104 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 RABL2BQ9UNT1 228 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 SH3GLB1Q9Y371 365 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 TTC26A0AVF1 554 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 MBLAC1A4D2B0 266 aaPredicted RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 SORBS3O60504 671 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 NOL4O94818 638 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 MOCS3O95396 460 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 FGFR1OPO95684 399 aaKnown RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 KRT18P05783 430 aaKnown RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 CALB2P22676 271 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 DNM2P50570 870 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 PDE6CP51160 858 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 COPS2P61201 443 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 HIC1Q14526 733 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 KIAA0753Q2KHM9 967 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 DDX42Q86XP3 938 aaKnown RBP eCLIP10.39□□□□□ -0.75
NOD1-208ENST00000489614 APLFQ8IW19 511 aaPredicted RBP10.39□□□□□ -0.75
NOD1-208ENST00000489614 NRBP2Q9NSY0 501 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 RNF186Q9NXI6 227 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 ERAP1Q9NZ08 941 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 CAPN6Q9Y6Q1 641 aa10.39□□□□□ -0.75
NOD1-208ENST00000489614 GTPBP10A4D1E9 387 aaKnown RBP10.38□□□□□ -0.75
NOD1-208ENST00000489614 TMEM247A6NEH6 219 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 TMEM110-MUSTN1A8MSY1 372 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 ZFXP17010 805 aaPredicted RBP10.38□□□□□ -0.75
NOD1-208ENST00000489614 HNRNPH3P31942 346 aaKnown RBP10.38□□□□□ -0.75
NOD1-208ENST00000489614 FCGRTP55899 365 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 GJA9P57773 515 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 FAM187BQ17R55 369 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 SCUBE1Q8IWY4 988 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 NELFCDQ8IXH7 590 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 EXOC8Q8IYI6 725 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 PLEKHO2Q8TD55 490 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 AFG1LQ8WV93 481 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 ABHD8Q96I13 439 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 ACCSQ96QU6 501 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 DNAJC7Q99615 494 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 METTL5Q9NRN9 209 aaKnown RBP10.38□□□□□ -0.75
NOD1-208ENST00000489614 TLDC2A0PJX2 215 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 ANKRD63C9JTQ0 380 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 CHN1P15882 459 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 CASP4P49662 377 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 UBXN1Q04323 297 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 KIF5AQ12840 1032 aa10.38□□□□□ -0.75
NOD1-208ENST00000489614 MTERF2Q49AM1 385 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms